Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 187 3e-42
seq3 96.9 4e-15
>seq1
Length=3734243
Score = 187 bits (206), Expect = 3e-42
Identities = 566/865 (65%), Gaps = 17/865 (2%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||||||| ||||| | ||||| || | || || ||||| ||||| ||||| | ||
Sbjct 742454 CCCACAGCACATGATTATGCGTGTATCTATTGGAATCCATGGGGATGACATCCCTCGAGT 742395
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
|||||||| || || ||| ||| ||||||| ||||| | || ||| | |
Sbjct 742394 TTTGGAGACTTATGAACTTATGAGCCAGAAGATGTTCACGCACGCCAGCCCTACCTTGTA 742335
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||||||||||| || ||||||||||| || ||| | | | |||| ||
Sbjct 742334 TAATGCTGGTACGCCTCAGGCGCAGATGTCCTCATGTTTCTTGGTTCAAATGCAGGATGA 742275
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
||||| | || || || | || | | | ||||||| ||||| |||| |||||
Sbjct 742274 TTCAATTGAAGGGATTTACGATACGTTGAAGACTTGTGCGCTCATCTCTAAGTCTGCTGG 742215
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||||||| | | || || | | | || | || |||| || |||||
Sbjct 742214 GGGTATTGGTCTCAATATTCACAACATTCGCGCTACAGGCTCATATATTGCTGGAACAAA 742155
Query 75511 TGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
||| | | || |||||||| | || ||| | || || | || ||||| || || |
Sbjct 742154 CGGTACCAGCA-ATGGTATTTTGCCCATGTTGCGTGTGTACAATAATACAGCTCGATACG 742096
Query 75570 TAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626
| |||||| || | ||| ||| | |||| | || || || || |||||||
Sbjct 742095 TGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGAGCCGTGGCATG 742036
Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686
|| | | ||||| |||| || || || || || | || ||| |||
Sbjct 742035 ATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGAGATTCGTGCGC 741976
Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746
||||| | || | || ||||||||||| | ||||||||||| ||| | |||| ||
Sbjct 741975 GAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGTTAAAGAGGATG 741916
Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806
| | ||| ||||| | |||||| | | || ||||| |||||| | ||||| |
Sbjct 741915 GAGATTGGACTCTTATGTGTCCAAGCGAATGTCCTGGTCTAGCCGACGTGTATGGTGACG 741856
Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866
| || || | || ||||||||||| || || |||| || || | ||||||
Sbjct 741855 AATTCGAGGAGCTGTACACAAAGTACGAGAAGCTAGGTAAAGGT----CGTC-GTACCAT 741801
Query 75867 CC--GCCGATG---TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921
| || | | ||| | || ||||| || | || || ||||| || | || ||
Sbjct 741800 CAAGGCACAAAAACTGTGGTACGCAATTCTTGAAGCCCAAACTGAGACAGGTAATCCGTA 741741
Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981
|||||| |||||||||||| || ||| |||||||||||| ||||| ||||||||
Sbjct 741740 TATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGTACAATCAA 741681
Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACAC-AGATAAGGATGAGACGGCTGTTT 76040
||| || ||||||||| || ||| | |||| | | || | || || |||||||
Sbjct 741680 GAGTTCCAATCTTTGCTGCGAGATTGTCGAGTTCTCGAGCCCA-GACGAAGTTGCTGTTT 741622
Query 76041 GCAATTTGGCATCAATCGCCCTTCC 76065
|||| ||||| |||||||| |||||
Sbjct 741621 GCAACTTGGCCTCAATCGCTCTTCC 741597
Score = 107 bits (118), Expect = 2e-18
Identities = 279/420 (66%), Gaps = 4/420 (1%)
Strand=Plus/Minus
Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568
||||||||||||| || || |||||| | || || ||||| |||||||||||| || |
Sbjct 741147 TGGCACCAATGCCCACTGCTTCCACCTCCCAGATTTTGGGCTTTAATGAATGCTTCGAGC 741088
Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628
| ||||| ||||||| || | | | | ||||||||||| | || |||
Sbjct 741087 CTTACACGTCAAACATTTATTCGCGTCGTGTTTTGGCAGGTGAGTTCCAAGTCGTGAACC 741028
Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 76688
| | |||| || | | || || | ||| | | || |||||| | | |
Sbjct 741027 CATATTTGCTCAAGGATTTGGTCGAAATGGGATTGTGGAACGATGACATGAAGAACCGTA 740968
Query 76689 TGGT-GAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747
| || | ||||| || || ||||| |||| | || || ||||| | ||| |
Sbjct 740967 TCGTTGCTAGCGGA-GGATCAATTCAGTCTATCCCGTCAATTCCTGATGAACTGAAGCAG 740909
Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGT 76807
|| ||| ||||| ||||| || | ||||| |||||||||||||||||||||||
Sbjct 740908 CTGTACAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCATTGACATGGCCGCAGATCGT 740849
Query 76808 GGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTC 76866
| ||| || || |||||| ||| | | ||| ||| |||| | ||||| || |||
Sbjct 740848 GC-CGCGTTTATCGATCAATCCCAATCTCTCAATATATACATGCAGAGTCCTACAATGGG 740790
Query 76867 CAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTA 76926
|||||| | ||||| | || | ||| |||| ||||||||||| ||||| ||
Sbjct 740789 CAAGCTGACCAGCATGCACTTTTATGGTTGGTCTAAGGGTCTCAAAACCGGTATGTATTA 740730
>seq3
Length=2099697
Score = 96.9 bits (106), Expect = 4e-15
Identities = 384/587 (65%), Gaps = 32/587 (5%)
Strand=Plus/Plus
Query 64946 TGATTGACAAATACATTAAGGATGGATCTGAAA-AGA---AGCAGTTATTTGAAGCCATC 65001
||||||||| ||| ||||||||| | |||| || |||| | || | |||||
Sbjct 1027659 TGATTGACACATATATTAAGGAT----CCGAAAGAGGCACAGCACCTGTTCAATGCCATT 1027714
Query 65002 CAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACA 65058
| || | || || |||| || ||||| || ||||| || ||| | |||
Sbjct 1027715 GAGACCATTCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGCTGGATCAGTGATCGC 1027774
Query 65059 AAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTC 65118
|||| | | || || ||||||||| | |||||||| ||| ||||| |||||||||
Sbjct 1027775 GAGTC---CACATTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTC 1027831
Query 65119 TCCGGGTCATTCTGC--GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTAT 65176
|| || || ||| || || || | ||| | |||||||| || |||||||| || ||
Sbjct 1027832 TCAGGCTCTTTC-GCAAGC-ATCTTCTGGCTAAAGAAGCGCGGCCTCATGCCTGGTCTTA 1027889
Query 65177 GCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGC 65236
|| || ||||| || ||||| || ||||| ||| | || || |||| | || |
Sbjct 1027890 CATTTTCTAATGAGCTAATTTCTCGCGATGAAGGTATGCATACTGATTTTG-CTTGCCTC 1027948
Query 65237 -TCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGA 65294
| |||| | || ||| || | || | || | ||| | || | | ||
Sbjct 1027949 TTGTTCACGCACCTTG-AAAACCGCCCGTCGCGTGAGATCATCGAGCGGATTATCACTGA 1028007
Query 65295 GGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTA-ATCTCATCGGTA 65353
|||||||||||| ||||| | ||| || || || ||||| ||| ||| | || |
Sbjct 1028008 GGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCC-CGTATCTCTTTTGGGCA 1028066
Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413
|||| | || |||| | |||||||||||| || | || || | |||
Sbjct 1028067 TGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTTGCCGACCGCTTGCTCGTGGCTC 1028126
Query 65414 TTGGGGTGCCA-CCCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATT 65469
||| |||| |||| | | | || ||| || ||||| || ||||| || ||
Sbjct 1028127 TTG----GCCATCCCAAGGTGTACAGCGTTGCGAACCCCTTTGATTTCATGGAGAATATC 1028182
Query 65470 AGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|||| || |||||||||||||||||||||||||| ||||||
Sbjct 1028183 TCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAGTCTCGGACTA 1028229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569570171520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |