Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 3e-21
seq4 104 7e-17
seq1 102 2e-16
>seq2
Length=2224469
Score = 118 bits (130), Expect = 3e-21
Identities = 220/320 (69%), Gaps = 10/320 (3%)
Strand=Plus/Plus
Query 302562 AATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGT 302621
|| |||||| ||||||| ||| | | ||| ||||| ||||||||||| | |||
Sbjct 1891227 AACCATAATATCTTCCAGCGCCTTTACGAGACGCCGCTGGATATAACCAGTCTCGGCTGT 1891286
Query 302622 TTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTC 302681
|| || |||||||| || ||||| |||||||| |||||||||| ||||| | |||||
Sbjct 1891287 CTTGACGGCTGTATCGATAAGACCCTCACGACCAGCCATAGCATGAAAGAAGAACTCTTG 1891346
Query 302682 CGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAA---TC 302738
|| | || | || | || |||| || || || || || |||||| ||
Sbjct 1891347 TGGAGTCAAACCACGAAGGTATGAATTCTCCACAAATCCCTTCGATTCAGGCGAATAGTC 1891406
Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798
|||| | || || || || || || | || || | ||| | | |||||| ||
Sbjct 1891407 GTCGCGCATG---AAATGAGGTAGTGTACGGTCGACAAATCCGAACGCAATACGCCGACC 1891463
Query 302799 ATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCACTGCCC 302856
|||||| |||| || || | ||| | ||||||||||||| || | ||| | ||||
Sbjct 1891464 TTCAACGATCTGTTGGCCAACGCAGGCGCTCATCTGCGAAATGTTAATGAATGA--GCCC 1891521
Query 302857 TTGGAGCCAGCATTTACCAT 302876
|| || |||||| |||||||
Sbjct 1891522 TTAGACCCAGCACTTACCAT 1891541
Score = 105 bits (116), Expect = 2e-17
Identities = 119/156 (76%), Gaps = 5/156 (3%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| | |||||||| ||| || | |||||||||
Sbjct 1890466 AGAATTTCCTTGAGACGAGGTACACCAAGAGTTACGTT---CTTTGAAGACACACCAGCA 1890522
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||| || || || || | || |||| ||||||||||| || ||||||||
Sbjct 1890523 TAGTGGAATGTGTTTAGCGTCATCTGCGTAGCCGGCTCACCAATCGACTGCGCCGCAATG 1890582
Query 301933 ATACCAACCATTTCTCCTGG-TGCTACAATAGACTT 301967
|||||||||||||| ||||| ||| ||||||| ||
Sbjct 1890583 ATACCAACCATTTCGCCTGGATGC-GCAATAGATTT 1890617
>seq4
Length=412403
Score = 104 bits (114), Expect = 7e-17
Identities = 167/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 251425 CACACATGGACGCTGTAAGCATCAGATGCGTC-ATATAGCCGACCCTTGGTGAA-GCGAG 251482
|| || ||||| ||| | ||||| || || || ||| || || |||| ||| |||
Sbjct 167119 CATACGTGGACTCTGAATGCATCCGAGGCTTCCATA-AGACGCTCCTTTAGGAACGCGGC 167177
Query 251483 ATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGC 251542
| ||||| |||| |||||||||||||||||||||||| || || ||||| ||||| || |
Sbjct 167178 A-GCACCATGTGCAATCATACAATCACGCTCCATTTCTCCAAATCGAAGGCCACCGTCAC 167236
Query 251543 GAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTAT 251602
||| | ||||||| | || ||||| || ||| | || ||||| | || ||
Sbjct 167237 GAGAGCGACCCTCGACTGGTTGACGTGTCAGAATCTGCACTGGACCACGAGCACGAGCAT 167296
Query 251603 GTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
| |||||||| |||||||| | | || ||||| ||| || |||| |||
Sbjct 167297 GAATCTTATCATCCACCATATGTCTCAACCGTTGGTAATATGTAGGTCCGAAGAA 167351
Score = 100 bits (110), Expect = 8e-16
Identities = 109/142 (77%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
|||||| || ||||||||||||||||| |||||||| |||| || || ||||| |||
Sbjct 167178 AGCACCATGTGCAATCATACAATCACGCTCCATTTCTCCAAATCGAAGGCCACCGTCACG 167237
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTA-AAACAGTTCTTGGACCCTGAGCACGATAAT 233390
|| | ||||| ||||| |||||| || | || | | | |||||| |||||||| ||
Sbjct 167238 AGAGCGACCCTCGACTGGTTGACGTGTCAGAATCTGCAC-TGGACCACGAGCACGAGCAT 167296
Query 233391 TAATTTTATCTTTAACCATATG 233412
||| ||||| | ||||||||
Sbjct 167297 GAATCTTATCATCCACCATATG 167318
>seq1
Length=3734243
Score = 102 bits (112), Expect = 2e-16
Identities = 409/639 (64%), Gaps = 9/639 (1%)
Strand=Plus/Plus
Query 155634 TCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGAT 155693
|| |||||||| ||||| || || ||||||||||| || || || ||||| ||||||||
Sbjct 741651 TCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGAC 741710
Query 155694 TTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCC 155753
|||| || |||||||||||| || || || || | |||||||| | || || ||
Sbjct 741711 TTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCA 741770
Query 155754 AGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTG-TATCTGCCTTCCGACTC 155812
||||| ||| || | | || || | | | | | | | ||| | |||
Sbjct 741771 AGAATTGCGTACCACAGTTTTTGTGCCTTGA-TGGTACGACGACCTTTACCTAGCTTCTC 741829
Query 155813 ATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTT 155872
|| || | |||||| | | || ||||| || || || ||||| || |
Sbjct 741830 GTACTTTGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTC 741889
Query 155873 ATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACT 155932
|| || | || | |||| | || | | || |||| ||| || | |||
Sbjct 741890 GCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGG 741949
Query 155933 CGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCG 155992
||| | |||| ||| | || | || |||||| | || ||||| |||||
Sbjct 741950 AATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCG 742009
Query 155993 TAGCTCTAAGAATTCCTCAATA--TCAGGATGGTGTGGCTCCAGATACATAGCAAAACTA 156050
| || | || || |||| ||| ||| ||||| | ||| || || ||| |
Sbjct 742010 CAAATCAATAAACTC--AAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCA 742067
Query 156051 CC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGC 156107
|| | | ||||| || ||||| || || ||||| || |||||| | |||| | |
Sbjct 742068 CCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAAC 742127
Query 156108 ATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGA 156167
|| || | |||||||||| || || || ||||| ||||| || || | | ||||
Sbjct 742128 ATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGA 742187
Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227
| || ||||||| || |||||||| || | | ||||| || | || || |||
Sbjct 742188 ATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTC 742247
Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATT 156266
| |||| | |||| |||||||| |||||||| | ||||
Sbjct 742248 AACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATT 742286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817524569348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |