Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 1e-15
>seq3
Length=2099697
Score = 102 bits (112), Expect = 1e-15
Identities = 204/299 (68%), Gaps = 9/299 (3%)
Strand=Plus/Minus
Query 869169 CACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGA 869228
|| ||||| |||||| |||||| || | || || ||| | || || |||||||
Sbjct 1027934 CAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGA 1027875
Query 869229 GGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGA 869288
||||||||||||| ||||| |||||| |||| ||| ||||| ||||| ||||| |
Sbjct 1027874 GGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAA 1027815
Query 869289 CGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACT 869348
| || ||||| | | || ||||| ||||| ||| || | | | |||||||
Sbjct 1027814 CAGCAGCAAACGCCACAAGGCGCTCTGCAAA--TGTGGACTCGC-GATCACTGATCCAGC 1027758
Query 869349 TCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT 869408
|| |||||| | |||||||| | | || | || || ||||| || ||||
Sbjct 1027757 GCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAGGT 1027698
Query 869409 GGT---CCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464
| | ||| || ||| ||||| | ||| ||||| |||||||| || || ||||||
Sbjct 1027697 GCTGTGCCTCTT---TCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGTCTCC 1027642
Score = 89.7 bits (98), Expect = 6e-12
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768
|| ||| ||| || ||||||||||| ||| | |||||||| |||||| | ||
Sbjct 1028220 ACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAG 1028161
Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCAT--CCGAGCGACGCGAGCAGGCGGTCGGCGA 868826
||||| | |||| ||| | || || || | | |||||| ||||||||| |
Sbjct 1028160 GGGTTCGCAACGCTGTACACCTTG--GGATGGCCAAGAGCCACGAGCAAGCGGTCGGCAA 1028103
Query 868827 CAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCG 868886
| ||||| ||||||||||||||||| || |||||||| | || | || || ||||
Sbjct 1028102 CGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGCG 1028043
Query 868887 ACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGC 868936
|| | | || || ||||||||||| || ||||| ||| ||| ||
Sbjct 1028042 CATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGC 1027993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138871741268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |