Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-15 >seq3 Length=2099697 Score = 102 bits (112), Expect = 1e-15 Identities = 204/299 (68%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 869169 CACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGA 869228 || ||||| |||||| |||||| || | || || ||| | || || ||||||| Sbjct 1027934 CAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGA 1027875 Query 869229 GGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGA 869288 ||||||||||||| ||||| |||||| |||| ||| ||||| ||||| ||||| | Sbjct 1027874 GGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAA 1027815 Query 869289 CGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACT 869348 | || ||||| | | || ||||| ||||| ||| || | | | ||||||| Sbjct 1027814 CAGCAGCAAACGCCACAAGGCGCTCTGCAAA--TGTGGACTCGC-GATCACTGATCCAGC 1027758 Query 869349 TCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT 869408 || |||||| | |||||||| | | || | || || ||||| || |||| Sbjct 1027757 GCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAACAGGT 1027698 Query 869409 GGT---CCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||| || ||| ||||| | ||| ||||| |||||||| || || |||||| Sbjct 1027697 GCTGTGCCTCTT---TCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGTCTCC 1027642 Score = 89.7 bits (98), Expect = 6e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 || ||| ||| || ||||||||||| ||| | |||||||| |||||| | || Sbjct 1028220 ACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAG 1028161 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCAT--CCGAGCGACGCGAGCAGGCGGTCGGCGA 868826 ||||| | |||| ||| | || || || | | |||||| ||||||||| | Sbjct 1028160 GGGTTCGCAACGCTGTACACCTTG--GGATGGCCAAGAGCCACGAGCAAGCGGTCGGCAA 1028103 Query 868827 CAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCG 868886 | ||||| ||||||||||||||||| || |||||||| | || | || || |||| Sbjct 1028102 CGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGCG 1028043 Query 868887 ACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGC 868936 || | | || || ||||||||||| || ||||| ||| ||| || Sbjct 1028042 CATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGC 1027993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138871741268