Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 seq1 84.2 2e-11 >seq2 Length=2224469 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761 |||||||||| || | || |||||||| || || || ||||||||||| || || Sbjct 961339 CGATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACCATTACGCTCGAGGTTGAGAGTT 961398 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | || || | || | || || ||||| || || || || || || || || | Sbjct 961399 CGGATACCATTGACGCTGTCAAGAGCAAGATTGCCGATAAGGAGGGCATCCCCCCTGACC 961458 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| | |||||||| || || ||||| |||||| | | | | || || || | Sbjct 961459 AGCAGCGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGTACCCTCTCGGACTACA 961518 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 | ||||||||||| ||||| |||||| | ||| Sbjct 961519 ATATTCAAAAGGAGTCGACTCTACACCTTGTG 961550 >seq1 Length=3734243 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT-GATCAAGTCGTTTAT 138491 |||| ||| || || ||||||||||||| ||| || | | || || ||| || || | Sbjct 740961 GCAACGATACGGTTCTTCATGTCATCGTTCCACA-ATCCCATTTCGACCAAATCCTTGAG 741019 Query 138492 CAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTT 138551 || |||| ||| | ||| || || ||||| ||||| || ||||| |||||||| Sbjct 741020 CAAATATGGGTTCACGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATGTTTGA 741079 Query 138552 GGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611 ||| ||||||| || |||| || |||| |||||| | |||| || || ||||| Sbjct 741080 CGTGTAAGGCTCGAAGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCAT 741139 Query 138612 GTACGCCACCAAAAGAGAATTCCGTAAACCGTG 138644 ||||| | ||| || || || || || || Sbjct 741140 TGGTGCCACAAGAAGCGAGTTGCGCAACCCATG 741172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897577505120