Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 5e-13
seq1 84.2 2e-11
>seq2
Length=2224469
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761
|||||||||| || | || |||||||| || || || ||||||||||| || ||
Sbjct 961339 CGATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACCATTACGCTCGAGGTTGAGAGTT 961398
Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
| || || | || | || || ||||| || || || || || || || || |
Sbjct 961399 CGGATACCATTGACGCTGTCAAGAGCAAGATTGCCGATAAGGAGGGCATCCCCCCTGACC 961458
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| | |||||||| || || ||||| |||||| | | | | || || || |
Sbjct 961459 AGCAGCGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGTACCCTCTCGGACTACA 961518
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
| ||||||||||| ||||| |||||| | |||
Sbjct 961519 ATATTCAAAAGGAGTCGACTCTACACCTTGTG 961550
>seq1
Length=3734243
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT-GATCAAGTCGTTTAT 138491
|||| ||| || || ||||||||||||| ||| || | | || || ||| || || |
Sbjct 740961 GCAACGATACGGTTCTTCATGTCATCGTTCCACA-ATCCCATTTCGACCAAATCCTTGAG 741019
Query 138492 CAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTT 138551
|| |||| ||| | ||| || || ||||| ||||| || ||||| ||||||||
Sbjct 741020 CAAATATGGGTTCACGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATGTTTGA 741079
Query 138552 GGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611
||| ||||||| || |||| || |||| |||||| | |||| || || |||||
Sbjct 741080 CGTGTAAGGCTCGAAGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCAT 741139
Query 138612 GTACGCCACCAAAAGAGAATTCCGTAAACCGTG 138644
||||| | ||| || || || || || ||
Sbjct 741140 TGGTGCCACAAGAAGCGAGTTGCGCAACCCATG 741172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897577505120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |