Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 134 2e-25 >seq3 Length=2099697 Score = 134 bits (148), Expect = 2e-25 Identities = 206/293 (70%), Gaps = 3/293 (1%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || || |||||||||||||||||||| ||||| |||||| |||| ||| ||||| Sbjct 1027887 AGACCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAG 1027828 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||| ||||| || || ||||| | || || ||||| ||||| ||| | || || Sbjct 1027827 AAGATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATC- 1027769 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 ||||||| || |||||||| |||||||| | |||| | || || ||| Sbjct 1027768 --ACTGATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATG 1027711 Query 794557 GCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAG 794616 || || ||||| | ||| ||| ||||| | || ||||| || ||||| ||| Sbjct 1027710 GCATTGAACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAG 1027651 Query 794617 TAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 || ||||| ||||| || || || || ||| ||||| |||||||| || || Sbjct 1027650 TAAGTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTT 1027598 Score = 102 bits (112), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 || ||| ||| || ||||||||||| ||| | |||||||| |||||| | || Sbjct 1028220 ACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAG 1028161 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTC---TCGCACCCGAGCGACGCAAGCAGGCGGTCGGCG 794033 ||||| || ||| ||| | || | |||| ||| |||| ||||||||| Sbjct 1028160 GGGTTCGCAACGCTGTACACCTTGGGATGGC-CAAGAGCCACG--AGCAAGCGGTCGGCA 1028104 Query 794034 ACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGC 794093 ||||| |||||||||||||||||||| || |||||||| | || | ||||| ||| Sbjct 1028103 ACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGC 1028044 Query 794094 GACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144 | || ||| || || ||||||||||| || ||||| |||| ||| || Sbjct 1028043 GCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGC 1027993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245974501756