Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 2e-25
>seq3
Length=2099697
Score = 134 bits (148), Expect = 2e-25
Identities = 206/293 (70%), Gaps = 3/293 (1%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
|| || |||||||||||||||||||| ||||| |||||| |||| ||| |||||
Sbjct 1027887 AGACCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAG 1027828
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496
||||| ||||| || || ||||| | || || ||||| ||||| ||| | || ||
Sbjct 1027827 AAGATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATC- 1027769
Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556
||||||| || |||||||| |||||||| | |||| | || || |||
Sbjct 1027768 --ACTGATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATG 1027711
Query 794557 GCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAG 794616
|| || ||||| | ||| ||| ||||| | || ||||| || ||||| |||
Sbjct 1027710 GCATTGAACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAG 1027651
Query 794617 TAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669
|| ||||| ||||| || || || || ||| ||||| |||||||| || ||
Sbjct 1027650 TAAGTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTT 1027598
Score = 102 bits (112), Expect = 1e-15
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976
|| ||| ||| || ||||||||||| ||| | |||||||| |||||| | ||
Sbjct 1028220 ACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAAG 1028161
Query 793977 GGGTTGGCCGTCAGGTAGTGCTTC---TCGCACCCGAGCGACGCAAGCAGGCGGTCGGCG 794033
||||| || ||| ||| | || | |||| ||| |||| |||||||||
Sbjct 1028160 GGGTTCGCAACGCTGTACACCTTGGGATGGC-CAAGAGCCACG--AGCAAGCGGTCGGCA 1028104
Query 794034 ACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGC 794093
||||| |||||||||||||||||||| || |||||||| | || | ||||| |||
Sbjct 1028103 ACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGC 1028044
Query 794094 GACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144
| || ||| || || ||||||||||| || ||||| |||| ||| ||
Sbjct 1028043 GCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGC 1027993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245974501756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |