Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 190 2e-42 >seq1 Length=3734243 Score = 190 bits (210), Expect = 2e-42 Identities = 678/1043 (65%), Gaps = 24/1043 (2%) Strand=Plus/Minus Query 281441 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 281500 ||||| |||||||| | ||| || ||||| ||||| |||||||| || | | || || Sbjct 1810906 ATACCGTTGGCATCAACATCGAAAGTGACCTCAATCTGAGGGACACCACGAGGCGCGGGG 1810847 Query 281501 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 281560 ||||| || | | ||| | || || ||| ||||| ||||| | || ||| Sbjct 1810846 GGGATGCCAGAGAGCTCGAATTTACCGAGCAAATTGTTATCCTTAGTTAGCGGACGCTCA 1810787 Query 281561 CCCTCGAAAATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAA---TAC 281616 |||||||| | ||||| |||| | | | ||||| || | ||||| | || | | Sbjct 1810786 CCCTCGAAGACCTGGATGAGTA-CACCGGGCTGATTGTCGGCGTAAGTGGAGAAGGTTTC 1810728 Query 281617 TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACC 281676 || || || |||||| || | ||| | ||| | ||||| | ||| || Sbjct 1810727 ACTC---TTCTTGGTAGGAATGGTCGAGTTGCGCGGAATCAGCTTGGTGAACTGACCGCC 1810671 Query 281677 AGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTT 281736 ||| || || | ||| | |||||||| | |||||| | || || || || ||| || | Sbjct 1810670 AGCGGTCTCAATACCCATCGAAAGAGGCGCGACATCGAGTAAGAGAAGATCCTGA-GTCT 1810612 Query 281737 TTCATCA-GTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 281795 | | | || | ||| ||||| || ||||||| |||||| || || |||||||||| Sbjct 1810611 TCGACGAAGTGTCACCCGAGAGAATTGCAGCTTGAACAGCAGCGCCGTAAGCAACAGCTT 1810552 Query 281796 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTC 281855 ||||||| || | | | || || | |||||| ||| || | || | ||| | || Sbjct 1810551 CATCAGGGTTGATTGACTTGTTGAGCTCTTTACCCGAGAAGAAGTCAGACACAAGCT-TC 1810493 Query 281856 T-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 281914 | |||||| || ||||||| || || || || | |||| ||| || || | || Sbjct 1810492 TGTACCTTGGGGATACGAGTGGAGCCACCGACCATGACAACTTCCTGGACGCTAGCCTTG 1810433 Query 281915 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT--CTAAACAAGT 281972 || | |||| |||| | ||| || || || || | || || | || | | Sbjct 1810432 TCGATCTTTGCATCCTTCAGAACCTTCTCTACTGGGGC--GATTGTCTGACGGAAGAGAT 1810375 Query 281973 CTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTC 282030 | || ||||| ||||| || | || || ||| | || || || || || || Sbjct 1810374 CCTGGCAGAGTTCCTCGAAGCGGGCAC--GTGTGATCGACGTATAGAAGTCGATACCCTC 1810317 Query 282031 GAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACG 282090 | ||| ||| || | || || | ||| ||||| || |||||| ||||| || ||||| Sbjct 1810316 GTACAGAGAGTCGATCTCGATGGGAGTCTGAGTGGAGCTAGATAGCGCACGCTTGGCACG 1810257 Query 282091 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAATCTGTTTTA 282148 || || || || | ||| | || | || |||||||| | | | || | || Sbjct 1810256 CTCGCAAGCAGTACGTAGACGGCGGAGAGC--ACGCTGATTGCCAGTAATGTCCTTCTTG 1810199 Query 282149 TATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCT 282208 || || | |||||| || | || | | ||||| || ||||| ||||| ||||| Sbjct 1810198 TACTTGCGCTTGAACTCAGTAGCAAAGTGGTTCACAAGGCGGTTATCGAAATCCTCACCA 1810139 Query 282209 CCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAA 282268 ||||| | ||||| || | ||||| | |||| ||||| ||||| |||| | | Sbjct 1810138 CCCAAGTGAGTATCACCAGCGGTAGCCTTGACTTCGAAAATGCCATCGTCAATGCTGAGA 1810079 Query 282269 AGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCT 282328 || | ||||| || |||||||||| ||| || || | ||||| || | Sbjct 1810078 AGCGAGACATCGAATGTACCACCACCCAAATCGAAGATCAAGACATTGTGGTCACCAACG 1810019 Query 282329 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 282388 || || |||||||| || |||| || ||||| || || || || || || | | Sbjct 1810018 GACTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATACGCTGC 1809959 Query 282389 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 282448 || || | ||| ||||| || ||||| || || ||||| | || |||||||| || Sbjct 1809958 ACGTTCAAACCGGCAATAAGGCCAGCATCCTTGGTAGCTTGACGCTGAGAATCGTTGAAG 1809899 Query 282449 TATGCAGGAACAGTAATAACGGC 282471 || |||||||| || ||||| || Sbjct 1809898 TAAGCAGGAACGGTGATAACAGC 1809876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740630203616904