Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
seq2 105 6e-18
seq1 89.7 5e-13
>seq3
Length=2099697
Score = 113 bits (124), Expect = 4e-20
Identities = 328/496 (66%), Gaps = 17/496 (3%)
Strand=Plus/Minus
Query 120363 GACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAA 120422
||| || |||||||| ||||| || || ||| | | ||| || || | ||| || || ||
Sbjct 1028221 GACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAA 1028162
Query 120423 CGGGTT-GCT-CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCT 120480
||||| || ||| || | || || ||||| | ||||||| ||||| ||
Sbjct 1028161 GGGGTTCGCAACGCTGTACACC--TTGGGATGGCCAAGAGCCACGAGCAAGCGGTCGGCA 1028104
Query 120481 ACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC 120540
|| ||||||||||||| ||||||| || || |||||||||| | | || || | |
Sbjct 1028103 ACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGC 1028044
Query 120541 GCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT---GGCGAGCATA 120597
|| |||| || |||||||| || || |||||||| ||| || ||| ||
Sbjct 1028043 GCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGCTCGATGATC 1027984
Query 120598 GTGTG-GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGT 120656
| | ||||| || ||| | | |||| | | | ||||| ||||| || ||
Sbjct 1027983 TCACGCGACGGGC----GGTTTTCAAGGTGCGT---GAACAAGAGGCAAGCAAAATCAGT 1027931
Query 120657 GTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCC 120716
|||| || || ||||| || || ||||| || ||| || || || ||||||| |||
Sbjct 1027930 ATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGAGGCC 1027871
Query 120717 TTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGAT 120776
| |||| | |||| ||| || || ||| || ||||| | ||||| ||
Sbjct 1027870 GCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAACAGC 1027811
Query 120777 GGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC-GATCCACTTCATGG 120835
||||| || || | |||||| || || || | | || | | | |||||| || |
Sbjct 1027810 AGCAAACGCCACAAGGCGCTCTGCAAATGTGGAC-TCGCGATCACTGATCCAGCGCAACG 1027752
Query 120836 CCCACTCGGCCTTTTT 120851
|||||| ||||||||
Sbjct 1027751 CCCACTTAGCCTTTTT 1027736
>seq2
Length=2224469
Score = 105 bits (116), Expect = 6e-18
Identities = 152/210 (72%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCT 133515
|||| || ||||| || || |||||||| || | | | | ||| ||||| ||||
Sbjct 961543 TGTAGAGTCGACTCCTTTTGAATATTGTAGTC--CGAGAGGGTACGTCCATCCTCTAGCT 961486
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || || ||||||||||| || |||||||| ||||| |||| ||||
Sbjct 961485 GCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCT 961426
Query 133576 TTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
| ||||| | || |||| || || | ||| || |||| || | ||| |||||
Sbjct 961425 TGCTCTTGA-CAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCC 961367
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
|| || || || |||||||||||||| |||
Sbjct 961366 GTTAGCGTCTTCACGAAAATCTGCATCGCT 961337
>seq1
Length=3734243
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|| || | ||||||||| ||| ||||||| |||||||| || |||||||| || || |||
Sbjct 2696258 TCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTG 2696199
Query 133566 TCGGTGATCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
|||| ||||| ||| | | || || | ||| || | || || || | ||||
Sbjct 2696198 TCGGCAATCTTGCTCTTAA-CGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGAT 2696140
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||| ||||| || || || || ||||||||||||||
Sbjct 2696139 GGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCAT 2696104
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420775828960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |