Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq2 105 6e-18 seq1 89.7 5e-13 >seq3 Length=2099697 Score = 113 bits (124), Expect = 4e-20 Identities = 328/496 (66%), Gaps = 17/496 (3%) Strand=Plus/Minus Query 120363 GACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAA 120422 ||| || |||||||| ||||| || || ||| | | ||| || || | ||| || || || Sbjct 1028221 GACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATGAAATCAAA 1028162 Query 120423 CGGGTT-GCT-CGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCT 120480 ||||| || ||| || | || || ||||| | ||||||| ||||| || Sbjct 1028161 GGGGTTCGCAACGCTGTACACC--TTGGGATGGCCAAGAGCCACGAGCAAGCGGTCGGCA 1028104 Query 120481 ACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC 120540 || ||||||||||||| ||||||| || || |||||||||| | | || || | | Sbjct 1028103 ACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGATACGGGGAGC 1028044 Query 120541 GCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT---GGCGAGCATA 120597 || |||| || |||||||| || || |||||||| ||| || ||| || Sbjct 1028043 GCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCCGCTCGATGATC 1027984 Query 120598 GTGTG-GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGT 120656 | | ||||| || ||| | | |||| | | | ||||| ||||| || || Sbjct 1027983 TCACGCGACGGGC----GGTTTTCAAGGTGCGT---GAACAAGAGGCAAGCAAAATCAGT 1027931 Query 120657 GTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCC 120716 |||| || || ||||| || || ||||| || ||| || || || ||||||| ||| Sbjct 1027930 ATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCATGAGGCC 1027871 Query 120717 TTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGAT 120776 | |||| | |||| ||| || || ||| || ||||| | ||||| || Sbjct 1027870 GCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAGATCCCCTCAACAGC 1027811 Query 120777 GGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC-GATCCACTTCATGG 120835 ||||| || || | |||||| || || || | | || | | | |||||| || | Sbjct 1027810 AGCAAACGCCACAAGGCGCTCTGCAAATGTGGAC-TCGCGATCACTGATCCAGCGCAACG 1027752 Query 120836 CCCACTCGGCCTTTTT 120851 |||||| |||||||| Sbjct 1027751 CCCACTTAGCCTTTTT 1027736 >seq2 Length=2224469 Score = 105 bits (116), Expect = 6e-18 Identities = 152/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 133458 TGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGCT 133515 |||| || ||||| || || |||||||| || | | | | ||| ||||| |||| Sbjct 961543 TGTAGAGTCGACTCCTTTTGAATATTGTAGTC--CGAGAGGGTACGTCCATCCTCTAGCT 961486 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || || ||||||||||| || |||||||| ||||| |||| |||| Sbjct 961485 GCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCT 961426 Query 133576 TTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 | ||||| | || |||| || || | ||| || |||| || | ||| ||||| Sbjct 961425 TGCTCTTGA-CAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCC 961367 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 || || || || |||||||||||||| ||| Sbjct 961366 GTTAGCGTCTTCACGAAAATCTGCATCGCT 961337 >seq1 Length=3734243 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || | ||||||||| ||| ||||||| |||||||| || |||||||| || || ||| Sbjct 2696258 TCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCTTTG 2696199 Query 133566 TCGGTGATCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 |||| ||||| ||| | | || || | ||| || | || || || | |||| Sbjct 2696198 TCGGCAATCTTGCTCTTAA-CGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTGAT 2696140 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || || |||||||||||||| Sbjct 2696139 GGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCAT 2696104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420775828960