Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 1e-31
seq2 84.2 5e-11
>seq1
Length=3734243
Score = 152 bits (168), Expect = 1e-31
Identities = 402/604 (67%), Gaps = 11/604 (2%)
Strand=Plus/Minus
Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602
|||||||| |||||||| ||||| ||| | || |||| ||| || || |||||
Sbjct 742279 GATGATTCAATTGAAGGGATTTACGATACG-TTGAAGACTTGTGCGCTCATCTCTAAGTC 742221
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | | |||| | |||||| | | ||| || |||| ||
Sbjct 742220 TGCTGGGGGTATTGGTCTCAATATTCACAACATTCGCGCTACAGGCTCATATATTGCTGG 742161
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| | || ||| | | ||| || | || ||||| | || | ||| | || ||
Sbjct 742160 AACAAACGGTACCAGCAATGGTATTTTGCCCATGTTGCGTGTGTACAATAATACAGCTCG 742101
Query 110723 ATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||| ||| ||||||| || |||| | || | || || || ||| | || || ||
Sbjct 742100 ATACGTGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGAGCCGTG 742041
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839
|||| || ||||||| || | || | || |||||||| ||| || || |
Sbjct 742040 GCATGATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGAGATTCG 741981
Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899
|| || |||||||| ||| | |||||| ||||||| |||||||| || ||| ||||
Sbjct 741980 TGCGCGAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGTTAAAGA 741921
Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATG 110958
|||| ||| ||||||||||||| | || | |||||||||| | || || ||||
Sbjct 741920 GGATGGAGATTGGACTCTTATGTGTCC-AAGCGAATGTCCTGGTCTAGCCGACGTGTATG 741862
Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCG-CAAACAA 111017
| | || || || || || ||| ||| || || || ||| || ||| | || |
Sbjct 741861 GTGACGAATTCGAGGAGCTGTACACAAAGTACGAGAAGCTAGGTAAAGGTCGTCGTACCA 741802
Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076
|| | || ||| |||| |||| | ||| |||||| | ||| ||| || || | |||
Sbjct 741801 --TCAAGGCACAAAAACTGTGGTACGCAATTCTTGAAGCCCAAACTGAGACAGGTAATCC 741744
Query 111077 TTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAAT 111136
||||| | || || ||| | ||||| || ||||| |||| ||| || || |||||
Sbjct 741743 GTATATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGTACAAT 741684
Query 111137 TAAG 111140
|||
Sbjct 741683 CAAG 741680
Score = 116 bits (128), Expect = 9e-21
Identities = 303/450 (67%), Gaps = 23/450 (5%)
Strand=Plus/Minus
Query 113001 AACTCTCTACTGTTGGCACCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAAT 113060
||||| || || ||||||||||||| || ||||| || | |||||| | || ||||
Sbjct 741160 AACTCGCTTCTTGTGGCACCAATGCCCACTGCTTCCACCTCCCAGATTTTGGGCTTTAAT 741101
Query 113061 GAATGTTTCGAGCCAATTACAAGT--AATATTTATGTCCGACGTGTTCTAGCAGGTGAGT 113118
||||| |||||||| ||||| || || |||||| || |||||| | ||||||||||
Sbjct 741100 GAATGCTTCGAGCC--TTACACGTCAAACATTTATTCGCGTCGTGTTTTGGCAGGTGAGT 741043
Query 113119 TTGTACTTTGTAATAAATATCTGCAAGAAGAACTTCTCGGAATCGGTAAATGGAACAATG 113178
| | | || |||| ||| | || | ||| ||| || |||||| |||
Sbjct 741042 TCCAAGTCGTGAACCCATATTTGCTCAAGGATTTGGTCGAAATGGGATTGTGGAACGATG 740983
Query 113179 AAGTGAAAAACTCCATTATTGCTAATCAAGGTTCGGTTCAACATCTA------AAATTGC 113232
| |||| ||| || |||||| ||| || |||| |||| |||| |
Sbjct 740982 ACATGAAGAACCGTATCGTTGCTAGCGGAGGATCAATTCA--GTCTATCCCGTCAATT-C 740926
Query 113233 CTGATTGCGTGAA--AGATGTATTTAAGACTATTTGGGAAATTAAGCAACGTGTCGTAAT 113290
||||| |||| || |||| ||||| | ||||| |||| || | | ||
Sbjct 740925 CTGATGAACTGAAGCAGCTGTA--CAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCAT 740868
Query 113291 TGATATGGCTGCAGATCGTGGCAAGTTTATCGATCAATCTCAGTCGATGAACTTATTTAT 113350
||| ||||| |||||||||| | ||||||||||||||| || || | || ||| ||
Sbjct 740867 TGACATGGCCGCAGATCGTGCCGCGTTTATCGATCAATCCCAATCTCTCAATATATACAT 740808
Query 113351 GCCGGACACCT-CACCAGATAAGGTGA-CATC-TGCTCTATTTTACGGCTGGAAAAAAGG 113407
| | || ||| || | ||| ||| || | ||| | ||||| || ||| || ||
Sbjct 740807 G-CAGAGTCCTACAATGGGCAAGCTGACCAGCATGCAC--TTTTATGGTTGGTCTAAGGG 740751
Query 113408 TTTAAAAACAGGTATGTATTATTTGCGAAC 113437
| | ||||| ||||||||||| ||||| ||
Sbjct 740750 TCTCAAAACCGGTATGTATTACTTGCGCAC 740721
>seq2
Length=2224469
Score = 84.2 bits (92), Expect = 5e-11
Identities = 131/184 (71%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365
|||||| | | || ||||| || ||||||||| | || || || || || || |||
Sbjct 1892477 AGACATCTCATGGATGATGATCCTGTACTGTTCAATCGCCAGCCTTCGCTACACAAGATG 1892418
Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAA--TGTAA 305423
||||||||||||||| || || || | | | |||||| || |||| ||| |
Sbjct 1892417 TCTATGATGGCTCATCGCGTAAAGGTTATGCCCTACTCGACATTCCGTCTAAACTTGTCA 1892358
Query 305424 GTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483
||| || | || |||||||| ||||| ||||| ||||||||||| |||| || || |
Sbjct 1892357 GTG-ACGT-CCCCATATAATGCCGATTTCGATGGTGATGAAATGAACTTGCACGTTCCAC 1892300
Query 305484 AATC 305487
| ||
Sbjct 1892299 AGTC 1892296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812739175844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |