Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 seq1 82.4 7e-11 >seq2 Length=2224469 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||| |||||||| | |||||| ||| || ||||| || || | | Sbjct 961534 GACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTCTAGCTGCTTGCCAGCA 961475 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || || || ||||| || ||||||| ||| || || | Sbjct 961474 AAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCTTGCTCTTGACA 961415 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 || | ||||| | ||| || |||| ||| | || || || || || || || Sbjct 961414 GCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTC 961355 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 961354 ACGAAAATCTGCAT 961341 >seq1 Length=3734243 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 148194 GGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTC 148253 ||| || || |||||||| |||| || || ||||| | ||| ||||| | | | Sbjct 742340 GGTAGGGCTGGCGTGCGTGAACATCTTCTGGCTCATAAGTTCATAAGTCTCCAAAACTCG 742399 Query 148254 TTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 |||||| || || || || || | | || ||||| | |||||||||||| ||||| Sbjct 742400 AGGGATGTCATCCCCATGGATTCCAATAGATACACGCATAATCATGTGCTGTGGGCGTTC 742459 Query 148314 GGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTA 148373 | |||| | ||| | ||||||||| ||| || | |||||| | |||||| | Sbjct 742460 GTGAACTCTACCGTTCAGCTTGAGAAGGTATGACCGCTCTAAAGTTTTGAAGCCAAAGAA 742519 Query 148374 CTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 ||||||| || || | |||||| |||| || Sbjct 742520 ATTGTAATTGAAGTCACGGTCGTAAACGATCGC 742552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611176169440