Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 165 1e-34 >seq3 Length=2099697 Score = 165 bits (182), Expect = 1e-34 Identities = 374/551 (68%), Gaps = 10/551 (2%) Strand=Plus/Plus Query 1455731 GATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTAC 1455790 || |||||| |||||||| || || || ||| | ||||| || ||| | ||| Sbjct 1027343 GAGAACCCGGGTCGCTTTGTACTATTTCCTATCAGGTACCATGAAATTTGGCAGGCGTAT 1027402 Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGT 1455850 | |||| | |||||||| || ||||| ||||| ||| | || ||||| || | Sbjct 1027403 AAGAAAG-CGGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTCGGTAAGGATTTGAA 1027461 Query 1455851 CCACTGGGTG--TCGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907 |||||| |||| ||| | | || ||||| ||||| | | || ||||| || Sbjct 1027462 TGACTGGGACAATCGCATGAACAAGGATGAGCGATTCTTCATTTCGAATGTACTCGCATT 1027521 Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAG 1455966 ||| ||| ||| ||| ||||| || ||||||||||| | || || | || || Sbjct 1027522 TTT-CGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGTTGAGCGGTTCTCTGGT-GAA 1027579 Query 1455967 GTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCAC 1456026 || ||| | || |||||| | ||||| || ||||| ||| || || || || ||| Sbjct 1027580 GTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAATCATGATGGAGAATATTCAC 1027639 Query 1456027 TCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCAC 1456086 || || || ||||| |||||||| ||||| || | ||||| ||| ||| | ||| Sbjct 1027640 TCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGATCCGAAAGAGGCACAGCAC 1027699 Query 1456087 CTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAG 1456146 || || ||||| || || | || | | |||||||| | |||||| || Sbjct 1027700 CTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGC 1027759 Query 1456147 TGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCG 1456205 ||||||| | | | || ||| ||||| ||||| || || | ||||| || || | Sbjct 1027760 TGGATCAGTGATC-GCGAGTCCACA-TTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTG 1027817 Query 1456206 AGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCA 1456265 |||| ||||| ||||| ||| |||| |||||| ||||| |||||||||||||||| Sbjct 1027818 AGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCTCA 1027877 Query 1456266 TGCCCGGTCTT 1456276 |||| |||||| Sbjct 1027878 TGCCTGGTCTT 1027888 Score = 98.7 bits (108), Expect = 1e-14 Identities = 160/226 (71%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577 ||| ||| ||| ||||| || ||||||||||| || || ||| || |||| || | Sbjct 1027992 AGCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCG 1028051 Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637 | | || | |||||||| | || |||||||||||||||||||| | || || ||||| Sbjct 1028052 TATCTCTTTTGGGCATGAATG-CAAAGCTCATGTGCCAGTACATTG-AGTTCGTTGCCGA 1028109 Query 1456638 CCGCCTGCTCGCGGCGCTCGGC--TGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695 |||| |||||| ||| || ||| | | ||| ||| | || ||||| || Sbjct 1028110 CCGCTTGCTCGTGGCTCTTGGCCATCC---CAAGGTGTACAGCGTTGCGAACCCCTTTGA 1028166 Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 | |||||| |||||||| | ||| ||||||||||| || ||| Sbjct 1028167 TTTCATGGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAG 1028212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810814192648