Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 165 1e-34
>seq3
Length=2099697
Score = 165 bits (182), Expect = 1e-34
Identities = 374/551 (68%), Gaps = 10/551 (2%)
Strand=Plus/Plus
Query 1455731 GATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTAC 1455790
|| |||||| |||||||| || || || ||| | ||||| || ||| | |||
Sbjct 1027343 GAGAACCCGGGTCGCTTTGTACTATTTCCTATCAGGTACCATGAAATTTGGCAGGCGTAT 1027402
Query 1455791 CAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGT 1455850
| |||| | |||||||| || ||||| ||||| ||| | || ||||| || |
Sbjct 1027403 AAGAAAG-CGGAGGCCTCTTTCTGGACTGCCGAAGAGATTGATCTCGGTAAGGATTTGAA 1027461
Query 1455851 CCACTGGGTG--TCGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTT 1455907
|||||| |||| ||| | | || ||||| ||||| | | || ||||| ||
Sbjct 1027462 TGACTGGGACAATCGCATGAACAAGGATGAGCGATTCTTCATTTCGAATGTACTCGCATT 1027521
Query 1455908 TTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTT-TATGAAAGAG 1455966
||| ||| ||| ||| ||||| || ||||||||||| | || || | || ||
Sbjct 1027522 TTT-CGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGTTGAGCGGTTCTCTGGT-GAA 1027579
Query 1455967 GTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCAC 1456026
|| ||| | || |||||| | ||||| || ||||| ||| || || || || |||
Sbjct 1027580 GTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAATCATGATGGAGAATATTCAC 1027639
Query 1456027 TCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCAC 1456086
|| || || ||||| |||||||| ||||| || | ||||| ||| ||| | |||
Sbjct 1027640 TCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGATCCGAAAGAGGCACAGCAC 1027699
Query 1456087 CTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAG 1456146
|| || ||||| || || | || | | |||||||| | |||||| ||
Sbjct 1027700 CTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGC 1027759
Query 1456147 TGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCG 1456205
||||||| | | | || ||| ||||| ||||| || || | ||||| || || |
Sbjct 1027760 TGGATCAGTGATC-GCGAGTCCACA-TTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTG 1027817
Query 1456206 AGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCA 1456265
|||| ||||| ||||| ||| |||| |||||| ||||| ||||||||||||||||
Sbjct 1027818 AGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCTCA 1027877
Query 1456266 TGCCCGGTCTT 1456276
|||| ||||||
Sbjct 1027878 TGCCTGGTCTT 1027888
Score = 98.7 bits (108), Expect = 1e-14
Identities = 160/226 (71%), Gaps = 7/226 (3%)
Strand=Plus/Plus
Query 1456518 AGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGG 1456577
||| ||| ||| ||||| || ||||||||||| || || ||| || |||| || |
Sbjct 1027992 AGCGGATTATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCGCTCCCCG 1028051
Query 1456578 TGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGA 1456637
| | || | |||||||| | || |||||||||||||||||||| | || || |||||
Sbjct 1028052 TATCTCTTTTGGGCATGAATG-CAAAGCTCATGTGCCAGTACATTG-AGTTCGTTGCCGA 1028109
Query 1456638 CCGCCTGCTCGCGGCGCTCGGC--TGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCC 1456695
|||| |||||| ||| || ||| | | ||| ||| | || ||||| ||
Sbjct 1028110 CCGCTTGCTCGTGGCTCTTGGCCATCC---CAAGGTGTACAGCGTTGCGAACCCCTTTGA 1028166
Query 1456696 ATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741
| |||||| |||||||| | ||| ||||||||||| || |||
Sbjct 1028167 TTTCATGGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAG 1028212
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177810814192648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |