Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 seq1 87.8 2e-12 >seq2 Length=2224469 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| |||||||| || || ||||||||||| |||||||| Sbjct 961567 CCACCACGGAGGCGAAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAG 961508 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| || | ||||||||| || || || Sbjct 961507 AGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGG 961448 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||| || ||||| ||||| | || || || || || Sbjct 961447 ATGCCCTCCTTATCGGCAATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACC 961388 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| |||||||| || || |||| || || |||||||| ||||| Sbjct 961387 TCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341 >seq1 Length=3734243 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || |||||||| ||||||||||| | || | Sbjct 2696321 AGGCGAAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGTACGG 2696262 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| ||||| || ||||| | ||||||||||| || || || || ||| Sbjct 2696261 CCATCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACCCTCT 2696202 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||| || || || || || | || || || ||| || || ||||| Sbjct 2696201 TTGTCGGCAATCTTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGACCTCAAGAGTG 2696142 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || | || || |||||||| ||||| || Sbjct 2696141 ATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATCTT 2696101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398374730080