Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 201 2e-46 seq3 123 3e-23 >seq1 Length=3734243 Score = 201 bits (222), Expect = 2e-46 Identities = 1346/2142 (63%), Gaps = 59/2142 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || ||||| || || | ||| || | | || || | || |||||||||||||| ||| Sbjct 740691 GTGAACTGGATTGGCGCGGAAGCTGCCTGAGTGCGCAAGTAATACATACCGGTTTTGAGA 740750 Query 68434 CC--TAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA-TCGGCT 68490 || ||||| || || || || ||||| || || || ||| | ||| || || Sbjct 740751 CCCTTAGAC--CAACCATAAAAGTGCATGCTGGTCAGCTTGCCCATTGTAGGACTCTGC- 740807 Query 68491 ATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTT 68550 || | ||||| | ||||| ||||||||| || || | | |||||| ||||| | Sbjct 740808 ATGTATATATTGAGAGATTGGGATTGATCGATAAACGCGGCACGATCTGCGGCCATGTCA 740867 Query 68551 ATAATACTCTTT-TGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGG 68609 || || | |||| || ||| ||||| | ||||| | | ||| || | ||||| || Sbjct 740868 ATGAT-CGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACAGCTGCTTCAGTTCATCAGG 740926 Query 68610 AAGGCTCG---TATTTTGAATGGATCCACCATCGGATAT-AATTATA---TTCTTGATCT 68662 || || || ||||| ||||| || | || || ||| ||||| || | Sbjct 740927 AATTGACGGGATAGACTGAATTGATCCTCC----GCTAGCAACGATACGGTTCTTCATGT 740982 Query 68663 CATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAA 68722 |||| ||||||||| | || ||| | | || | || || || || | ||| | Sbjct 740983 CATCGTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATATGGGTTCACGACTTGGA 741042 Query 68723 ATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 68782 | || || | || || | ||| | ||||| || || || || || | |||||| Sbjct 741043 ACTCACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTAAGGCTCGAAGCATTCAT 741102 Query 68783 TATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTT- 68841 || |||| ||| || | || || ||||| ||||| |||||||| || || | | || Sbjct 741103 TAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGCCAC-AAGAAGCGAGTTG 741161 Query 68842 CTAAGACCATGTGTTATGATTTTAT--CTTTTAGATGTTTCCAATCCCAAAGATCAGATG 68899 | | ||||| | | | | ||| | ||| ||||||||||||||| || | Sbjct 741162 CGCAACCCATGC-TCAGCCATCGACGACTTGAGGGTGTC-CCAATCCCAAAGATCTGAAG 741219 Query 68900 GTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATG 68959 | |||| ||| || || | || || || | ||| |||||| ||| | Sbjct 741220 GGGTAACACCCCAGAGGTCAAACTGCAGCTGGCCCTCTGAAGCAGGCGATCCAGGATAAG 741279 Query 68960 TTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAA 69019 ||||| | || || ||||||| || || || || | || ||| || | Sbjct 741280 ACTCATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCTTCAATAGCGGCGTGGTATA 741339 Query 69020 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTA 69079 |||| || || || | ||||||| || | || || | |||||||| || || ||| Sbjct 741340 TTGTCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGGCAAACGTA 741399 Query 69080 AAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTAT 69139 | || |||| || ||||| || || || |||| | | ||||| | ||| | | | | Sbjct 741400 GAGCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATGGCGCATGT 741459 Query 69140 TTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTC 69199 |||| | ||| || |||| ||| || || || | || ||||| || || || | Sbjct 741460 TTGAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTTGAGGTTCC 741519 Query 69200 GGACTACTACTTTAACCACGTCCTTTAG-TTTGAGAA----------AATCAA--ATCGT 69246 | |||| || ||| |||| || | || |||| ||| | || | |||| Sbjct 741520 GAACTAGAACCTTAGCCACATCATGGAGCTTTGCGAAGTTATAGAGTACTCCACCATCGC 741579 Query 69247 CCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 | || | | | | || || | || || | || ||||| || || || | Sbjct 741580 GCTGCTCGAGGTAGC-TGGGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTCT 741638 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | | | | | | ||||| || ||||| || ||||| || |||| || Sbjct 741639 GGGCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTC 741698 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 | || ||| ||| || || |||||||| || ||| ||||| |||| || ||| Sbjct 741699 TTTTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCA 741758 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT--TACG--GTCTTGTA 69482 | || | ||| | ||| | | ||| | || || || |||| | | | || Sbjct 741759 GTTTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGATGGTACGACGACCTTTA 741818 Query 69483 AC--GCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCA 69540 | ||||||| | | ||||||| | || |||||||| || || | || || Sbjct 741819 CCTAGCTTCTCGTACT----TTGTGTACAGCTCC--TCGAATTCGTCACCATACACGTCG 741872 Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600 | | ||||||||||| |||||||||| | | ||| | |||| || ||||| || Sbjct 741873 GCTAGACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGC 741932 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 ||||| || | ||| |||||||| ||||| | || | ||||| | | | | || || Sbjct 741933 TTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCT 741992 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 ||||| |||||| | ||| | |||||| | | ||| |||||| || |||| | Sbjct 741993 TTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAA 742052 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | | ||||| || ||||| || || ||||| | ||||| || || ||| Sbjct 742053 TAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTA 742112 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 || || || | || ||| || | ||||||||| |||| |||||||||| |||||| Sbjct 742113 TTGTACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATAT 742172 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 ||| | |||||||| || |||| ||||| || || || || |||||||| Sbjct 742173 GAGCCTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATG 742232 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 || |||||| ||||| || || || || || || || |||||| ||| | || Sbjct 742233 AGCGCACAAGTCTTCAACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACC 742292 Query 69961 AGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCG 70020 | ||||| ||||| || || || || |||||| | || ||||| ||| Sbjct 742293 AAGAAACATGAGGACATCTGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCG 742352 Query 70021 TGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCAC 70080 || |||||| || | | || | || || || | | || || || | Sbjct 742353 TGCGTGAACATCTTCTGGCTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCC 742412 Query 70081 TGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTA 70140 ||| ||||| || | |||||||| | ||| ||||| || ||||| | || Sbjct 742413 CCATGGATTCCAATAGATACACGCATAATCATGTGCTGTGGGCGTTCGTGAACTCTACCG 742472 Query 70141 TTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAG 70200 || | || | |||||||| || | |||||| || ||||| | ||||| ||| Sbjct 742473 TTCAGCTTGAGAAGGTATGACCGCTCTAAAGTTTTGAAGCCAAAGAAATTGTAATTGAAG 742532 Query 70201 TCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTA---TATTTGGTAACTATATCC 70257 || | ||||||| || |||| || | || ||| | | | || | ||||| ||| Sbjct 742533 TCACGGTCGTAAACGATCGCAGAGTTCAATTCATCTTCATGCTGTTGGATAACT---TCC 742589 Query 70258 ATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAAT 70317 ||| || || || || || |||| | | | ||||||||||| | | || Sbjct 742590 CAAACTTCCTTGGATATCATAGGTGAGTGTTTGTTAGTATGGGGATTAACATACTCGTAT 742649 Query 70318 AAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCT 70377 | ||| |||| ||| | || || || | || || || || || | || Sbjct 742650 AGATCGCGTGCTACAGTGGAGAATTGCTTCTTAGTCTGTTTATGCAAGTTCGAAACAGCA 742709 Query 70378 ATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA-GCTGCTATTTC 70436 || | |||||||||||| ||||| || |||||| || || || || || ||| | || Sbjct 742710 ATACGGGCTGCTAGAATCGCATAATCTGGATGTACAGTCGT-CATATAGGCGGCTGTCTC 742768 Query 70437 CGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATA 70478 || || | | |||| ||| | || || |||||||| || Sbjct 742769 AGCTGCAAGATTGTCTAGTTCCACTGTAGTCACTCCGTTGTA 742810 >seq3 Length=2099697 Score = 123 bits (136), Expect = 3e-23 Identities = 387/597 (65%), Gaps = 8/597 (1%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | ||| || || ||| ||| | || ||||| | | ||||| || |||||| Sbjct 1027953 AACAAGAGGCAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAA 1027894 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 ||||| || |||||||| || || ||||| || ||||| || ||| || ||||| || Sbjct 1027893 AATGTAAGACCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCT 1027834 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATC- 39786 || |||||||| || || || || ||||| || ||||| | |||| | | | | || Sbjct 1027833 GAGAAGAAGATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCG 1027774 Query 39787 --ATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || | ||||| | ||||| | ||| || || | || || || || || Sbjct 1027773 CGATCACTGATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCA 1027714 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || ||||| || || | ||| || | ||| |||| |||||| || || | || Sbjct 1027713 ATGGCATTGAACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGT 1027654 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || | || || || || || || ||| || || ||||| |||||||| |||| Sbjct 1027653 GAGTAAGTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCC 1027594 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 |||| ||||| || || | | || | || ||| || || || || || || || Sbjct 1027593 TCAGGGATTTGCACTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCG 1027534 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT--- 40081 || || |||||||| | ||||| ||| || || ||||| ||| || Sbjct 1027533 GAGGCTGCGAAAAATGCGAGTACATTCGAAATGAAGAATCGCTCATC-CTTGTTCATGCG 1027475 Query 40082 -TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGC 40140 || | ||||||||| | ||| || | ||| | ||||| || ||||| || || || Sbjct 1027474 ATTGTCCCAGTCATTCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGC 1027415 Query 40141 CTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||| || || || ||| | ||| || ||| | || || ||||| | ||||| Sbjct 1027414 CTCCGCTTTCTTATACGCCTGCCAAATTTCATGGTACCTGATAGGAAATAGTACAAA 1027358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908765654560