Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq3 140 3e-28 >seq3 Length=2099697 Score = 140 bits (154), Expect = 3e-28 Identities = 291/430 (68%), Gaps = 5/430 (1%) Strand=Plus/Plus Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA 43915 || ||||| || || |||||| || ||||| || || ||||| ||||| | Sbjct 1027517 GCATTTTTCGCAGCCTCCGACGGCATTGTCAACGAGAACCTGGTTGAGCGGTTCTCTGGT 1027576 Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 ||||| ||| | || || ||| ||||||||||| || ||||| || || |||||| Sbjct 1027577 GAAGTGCAAATCCCTGAGGCAAAGTGTTTTTATGGATTCCAAATCATGATGGAGAATATT 1027636 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCAT 44035 || ||||| | ||| || ||||| || || || || || ||| | | ||| || Sbjct 1027637 CACTCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGATCCGAAAGAGGCACAG 1027696 Query 44036 CGATTGTTTAATGCGATAGAAAC-AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCT 44094 | |||| ||||| || || || | | ||||| ||| | || || | ||||| | Sbjct 1027697 CACCTGTTCAATGCCATTGAGACCATTCCCTGC-ATTGCTAAAAAGGCTAAGTGGGCGTT 1027755 Query 44095 TAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCGTTTGCAGTTGT 44151 ||||| | | || || |||| ||| || ||||| |||||||| | ||| Sbjct 1027756 GCGCTGGATCAGTGATCGCGAGTCCACATTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGT 1027815 Query 44152 GGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTT 44211 || || || ||||| ||||| || || || ||| || ||| ||||||| || || | Sbjct 1027816 TGAGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGCGCGGCCT 1027875 Query 44212 GATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGA 44271 |||||||| | || ||||| |||||| |||| ||| |||||||| | ||| || Sbjct 1027876 CATGCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATGAAGGTATGCATACTGA 1027935 Query 44272 TTTTGCTTGC 44281 |||||||||| Sbjct 1027936 TTTTGCTTGC 1027945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455980624020