Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq2 87.8 2e-12
>seq1
Length=3734243
Score = 127 bits (140), Expect = 2e-24
Identities = 246/360 (68%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
||||||||||| |||||||| || | ||| | || | || || ||| |||||||| |||
Sbjct 741882 GGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAAC 741941
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722
||||| || | ||||| || || | ||||| || |||| ||| | ||||
Sbjct 741942 AAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCT-TTTCCATG 742000
Query 131723 Attttt-ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781
|||||| ||||| | ||| || || | ||| ||||||| || || ||||| | |||
Sbjct 742001 ATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGC 742060
Query 131782 CATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838
| || || ||||||| |||||||||| || | ||| | | || ||||| ||
Sbjct 742061 GAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACAC 742120
Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898
|||||||||||| | ||| ||| | | || || || | ||| || ||| |
Sbjct 742121 ACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGT 742180
Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958
|| | || ||||||| ||||| |||||||| || | | |||||||| || || ||
Sbjct 742181 AGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACA 742240
>seq2
Length=2224469
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27045 TGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGT 27104
|||| || || || ||||||||||||||||| | | | || | || || |||||
Sbjct 961543 TGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTCTAGCTGC 961484
Query 27105 TTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTG 27164
|| || || | || |||||||| || || || || | ||||| |||||||| ||||||
Sbjct 961483 TTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCTTG 961424
Query 27165 TTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTC 27224
| || | | || | || || | ||||| || || || || | ||||||||
Sbjct 961423 CTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCCGTT 961364
Query 27225 AGAGTTTTCACAAAGATTTGCATAGCTG 27252
|| || ||||| || || ||||| ||||
Sbjct 961363 AGCGTCTTCACGAAAATCTGCATCGCTG 961336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934379284448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |