Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq2 87.8 2e-12 >seq1 Length=3734243 Score = 127 bits (140), Expect = 2e-24 Identities = 246/360 (68%), Gaps = 5/360 (1%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 ||||||||||| |||||||| || | ||| | || | || || ||| |||||||| ||| Sbjct 741882 GGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAAC 741941 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 ||||| || | ||||| || || | ||||| || |||| ||| | |||| Sbjct 741942 AAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCT-TTTCCATG 742000 Query 131723 Attttt-ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 |||||| ||||| | ||| || || | ||| ||||||| || || ||||| | ||| Sbjct 742001 ATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGC 742060 Query 131782 CATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || || ||||||| |||||||||| || | ||| | | || ||||| || Sbjct 742061 GAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACAC 742120 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 |||||||||||| | ||| ||| | | || || || | ||| || ||| | Sbjct 742121 ACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGT 742180 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958 || | || ||||||| ||||| |||||||| || | | |||||||| || || || Sbjct 742181 AGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACA 742240 >seq2 Length=2224469 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27045 TGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGT 27104 |||| || || || ||||||||||||||||| | | | || | || || ||||| Sbjct 961543 TGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCCTCTAGCTGC 961484 Query 27105 TTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTG 27164 || || || | || |||||||| || || || || | ||||| |||||||| |||||| Sbjct 961483 TTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCGGCAATCTTG 961424 Query 27165 TTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTC 27224 | || | | || | || || | ||||| || || || || | |||||||| Sbjct 961423 CTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTCTTGCCCGTT 961364 Query 27225 AGAGTTTTCACAAAGATTTGCATAGCTG 27252 || || ||||| || || ||||| |||| Sbjct 961363 AGCGTCTTCACGAAAATCTGCATCGCTG 961336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934379284448