Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 174 2e-38
seq3 100 4e-16
>seq1
Length=3734243
Score = 174 bits (192), Expect = 2e-38
Identities = 563/864 (65%), Gaps = 15/864 (2%)
Strand=Plus/Plus
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT-GTGTACTCTAA 111288
||||| |||||||| ||||| ||||||||||| || || | || | | |||| |
Sbjct 741597 GGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAACTTCGTC-TGGGCTCGAGAACTCGAC 741655
Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348
||| || || | ||||||||||| || || ||||| |||||||||||| |||
Sbjct 741656 AATCTCGCAGCAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACG 741715
Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408
||| ||||||||||||||||| || || | || ||||| || || | || |||||
Sbjct 741716 ATTGGCAGCATCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAAT 741775
Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGG--CGTTGGCCCGTCCCT-CCGCCTCGT 111464
|| | ||| | | | | || | |||| || | || | ||| | |||||
Sbjct 741776 TGCGTACCACAGTTTTTGTGCCTTG----ATGGTACGACGACCTTTACCTAGCTTCTCGT 741831
Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524
|||||||||| || | || || || ||||| | |||||| ||||| || | |
Sbjct 741832 ACTTTGTGTACAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTCGC 741891
Query 111525 CTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 111584
|||||| | ||||| ||| | ||| | || | ||| ||||||||||| | |||||||
Sbjct 741892 TTGGACACATAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAA 741951
Query 111585 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 111644
|||| || | || | ||||| ||| ||| || | || || || || |
Sbjct 741952 TCCATAGAGCAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCA 742011
Query 111645 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCT 111704
| |||| ||||| | | || | ||||| ||||| | ||| | ||||| || |||
Sbjct 742012 AATCAATAAACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCG 742071
Query 111705 TTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761
|| | || |||||| || || || ||||| || | || || | ||| |
Sbjct 742072 GGCGCTTATTGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAACATGG 742131
Query 111762 GAATAATACCATCTGATTG-ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACA 111820
| | |||||||| || | | ||| ||||| || |||| || | || | |
Sbjct 742132 GCAAAATACCAT-TGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGAATG 742190
Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880
| || || | | |||||||||||||| |||| ||||| ||||||| | | |
Sbjct 742191 TTGTGAATATTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAAC 742250
Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940
|| | || || || | ||||| || |||| | | | ||| || |||||||
Sbjct 742251 GTATCGTAAATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGAAACATGAGGACATC 742310
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000
|||| || ||||||||||| | | ||| || | ||||| ||||||| |||
Sbjct 742311 TGCGCCTGAGGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGG 742370
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
||| || || |||||||| || | ||||| ||||| ||||| || || |
Sbjct 742371 CTCATAAGTTCATAAGTCTCCAAAACTCGAGGGATGTCATCCCCATGGATTCCAATAGAT 742430
Query 112061 ACCCGCATGAACATGTACTGTGGG 112084
|| ||||| | ||||| |||||||
Sbjct 742431 ACACGCATAATCATGTGCTGTGGG 742454
>seq3
Length=2099697
Score = 100 bits (110), Expect = 4e-16
Identities = 385/587 (66%), Gaps = 32/587 (5%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|||||| ||| ||||||||||||||||||||||| || |||| || || |||||
Sbjct 1028229 TAGTCCGAGACTCGCTTCTCAAAGAAGTTGGTCTTACCCGCAAGCGAGATATTCTCCATG 1028170
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGGG-TGGCACCCCAACTTGTTTGAGGAG 122486
|| ||||| || ||| || | | | |||| |||| ||| ||| |
Sbjct 1028169 AAATCAAAGGGGTTCGCAACGCTGTACACCTTGGGATGGC----CAAGAGCCACGAGCAA 1028114
Query 122487 ACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG-GT 122545
|| || | || |||||||||||| | |||| || | ||||| || | || |
Sbjct 1028113 GCGGTCGGCAACGAACTCAATGTACTGGCACATGAGCTTTGCATTCATGCCCAAAAGAGA 1028054
Query 122546 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 122605
||| ||||| || || || ||| | ||||| |||||||||||||| | | ||
Sbjct 1028053 TACG-GGGAGCGCATCAGTGAGGAATTCCTTCTCGATCTCAACCGCCTCAGTGATAATCC 1027995
Query 122606 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGA-GCTCCACGGCAAA 122663
| ||| | || | || | || ||| || | |||| | | || | ||||
Sbjct 1027994 GCTCGATGATCTCACGCGACGGGCGGTTTT-CAAGGTGCGTGAACAAGAGGCAAG-CAAA 1027937
Query 122664 CTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCAT 122723
|| || | ||| ||||| || ||||| || ||||| || || ||||| |||||
Sbjct 1027936 ATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGACCAGGCAT 1027877
Query 122724 GAGACCCCGCTTCTTCAACCAATAAATAGC--GCAGAATGACCCGGAGAAGAAGATACCC 122781
||| || |||||||| | ||| | || || || ||| || || ||||||||||| |||
Sbjct 1027876 GAGGCCGCGCTTCTTTAGCCAGAAGAT-GCTTGC-GAAAGAGCCTGAGAAGAAGATCCCC 1027819
Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA---AAC 122838
|| ||| |||||||| | |||||| || || || | | |||| |||| | |
Sbjct 1027818 TCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTG---GACTCGCGATCACTGATC 1027762
Query 122839 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAAT 122898
|| || ||||| || ||||| || |||| || || | || | ||||| | ||
Sbjct 1027761 CAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTGAAC 1027702
Query 122899 AACTGCT---TCT-TTTCAGATCCATCCTTAATGTATTTGTCAATCA 122941
| |||| || |||| | ||||||||| ||| |||||||||
Sbjct 1027701 AGGTGCTGTGCCTCTTTCGG----ATCCTTAATATATGTGTCAATCA 1027659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031968598400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |