Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 251 8e-62
seq3 84.2 3e-11
>seq1
Length=3734243
Score = 251 bits (278), Expect = 8e-62
Identities = 1156/1807 (64%), Gaps = 69/1807 (4%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||||||| ||||| | ||||| || | || || || |||||||| ||||| | ||
Sbjct 742454 CCCACAGCACATGATTATGCGTGTATCTATTGGAATCCATGGGGATGACATCCCTCGAGT 742395
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
|||||||| || || ||| ||| ||||||| ||||| | || ||| | |
Sbjct 742394 TTTGGAGACTTATGAACTTATGAGCCAGAAGATGTTCACGCACGCCAGCCCTACCTTGTA 742335
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||||||||||| || | || |||||| || ||| | | | |||| ||
Sbjct 742334 TAATGCTGGTACGCCTCAGGCGCAGATGTCCTCATGTTTCTTGGTTCAAATGCAGGATGA 742275
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||||| | || || || | || | | | ||||||| ||||| |||| |||||
Sbjct 742274 TTCAATTGAAGGGATTTACGATACGTTGAAGACTTGTGCGCTCATCTCTAAGTCTGCTGG 742215
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||||||| | | || || | | | || | || |||| || |||||
Sbjct 742214 GGGTATTGGTCTCAATATTCACAACATTCGCGCTACAGGCTCATATATTGCTGGAACAAA 742155
Query 104521 TGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
||| | | || |||||||| | || ||| | || || | || ||||| || || |
Sbjct 742154 CGGTACCAGCA-ATGGTATTTTGCCCATGTTGCGTGTGTACAATAATACAGCTCGATACG 742096
Query 104580 TAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636
| |||||| || | || ||| || ||||| | ||| | ||||| ||||| |
Sbjct 742095 TGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGAGCCGTGGCATG 742036
Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC- 104695
|| | | ||||| |||| ||||| || || || | |||||| || |||
Sbjct 742035 ATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGAGATTCG-TGCG 741977
Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755
|| ||| | ||| ||||| |||||||||||| | ||||||||| | ||| | ||| |
Sbjct 741976 CGAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGTTAAAGAGGAT 741917
Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---GGT 104812
|| ||||| |||| | |||||| | | |||||||| |||| |||| |||
Sbjct 741916 GGAGATTGGACTCTTATGTGTCCAAGCGAATGTCCTGGTCTAGCCGA---CGTGTATGGT 741860
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872
|| || || || | || ||||||||||||||| ||| | || | || || |
Sbjct 741859 GACGAATTCGAGGAGCTGTACACAAAGTACGAG----AAGCTAGGTAAAGGTCGTCG-TA 741805
Query 104873 CCAGCT--GCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927
||| | || | ||||| | || ||||| | | ||||| ||||| |||| |
Sbjct 741804 CCATCAAGGCACAAAAACTGTGGTACGCAATTCTTGAAGCCCAAACTGAGACAGGTAATC 741745
Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987
| || ||||| ||||| || || || | ||| ||| |||||||| |||||| |
Sbjct 741744 CGTATATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGTACAA 741685
Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047
|||||||||||||||| || || || | || || | | ||| || ||||
Sbjct 741684 TCAAGAGTTCCAATCTTTGCTGCGAGATTGTCGAGTTCTCGAGCCCAGACGAAGTTGCTG 741625
Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG------A 105101
| || ||| | || ||||||||||| |||| || | || | || | | | |
Sbjct 741624 TTTGCAACTTGGCCTCAATCGCTCTTCCCAGCTACCTCGAGC-AGCGCGATGGTGGAGTA 741566
Query 105102 CATT-TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
| | | | | | ||| ||||| || || | || | | ||||| ||| |
Sbjct 741565 CTCTATAACTTCGCAAAGCTCCATGATGTGGCTAAGGTTCTAGTTCGGAACCTCAACTGC 741506
Query 105161 GTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACAC 105217
||||||| | || | ||||| ||| ||| |||||| || || ||| | ||
Sbjct 741505 ATTATTGAGAAGAACTACTACCCTGTTCCTGAG---GCTCGTCGCTCAAACATGCGCCAT 741449
Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-- 105275
|| || |||| ||| ||||| || ||| | || || ||||||||| | | |||
Sbjct 741448 CGCCCTATTGCTCTTGGTGTCCAAGGTTTGGCCGACA----CATTCTTTG-CTCTACGTT 741394
Query 105276 ---CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATC 105332
| || ||| | || ||| || ||||| | ||||||||||| || || |
Sbjct 741393 TGCCGTTCGATAGCCCTGAGGCGCGCGAGCTCAATATTCAAATATTTGAGACAATATACC 741334
Query 105333 ACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392
|||||||| |||| || || |||| | || | ||||||| ||||| | | |
Sbjct 741333 ACGCCGCTATTGAAGCTAGCGTAGAGCTAGCTGCTAGAGATGGTCACTATGAGTCTTATC 741274
Query 105393 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 105452
|| || || |||||| | || ||| || ||||| | |||| ||| ||| |
Sbjct 741273 CTGGATCGCCTGCTTCAGAGGGCCAGCTGCAGTTTGACCTCTGGG---GTGTTACCC--C 741219
Query 105453 TTCACTAC-----GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 105507
|||| | || ||||| | |||||| || ||| | || | || ||
Sbjct 741218 TTCAGATCTTTGGGATTGGGACACCCTCAAGTCGTCGATGGCTGAGCATGGGTTGCGCAA 741159
Query 105508 CAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 105567
| || || |||| |||||||| || || |||||| | || || ||||| ||||||
Sbjct 741158 CTCGCTTCTTGTGGCACCAATGCCCACTGCTTCCACCTCCCAGATTTTGGGCTTTAATGA 741099
Query 105568 ATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGT 105627
|||||| || || |||||| | ||||| ||| | | | | || || |||||
Sbjct 741098 ATGCTTCGAGCCTTACACGTCAAACATTTATTCGCGTCGTGTTTTGGCAGGTGAGTTCCA 741039
Query 105628 GATTGTCAACAAGCAT---CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGA 105684
| || ||| || ||| |||| || || || || | ||| | | ||
Sbjct 741038 AGTCGTGAACCCATATTTGCTCAAGGATTTGGTCGAA---ATGGGATTGTGGAACGATGA 740982
Query 105685 TATGAAGGATCTCATGGT-GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAA 105743
|||||| | | || || | ||||| || || ||||| ||| | |||||
Sbjct 740981 CATGAAGAACCGTATCGTTGCTAGCGGA-GGATCAATTCAGTCTATCCCGTCAATTCCTG 740923
Query 105744 ATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACA 105803
||||| | ||| || ||||| ||||| ||||| || | ||| | |||||||||
Sbjct 740922 ATGAACTGAAGCAGCTGTACAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCATTGACA 740863
Query 105804 TGGCCGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAA 105862
||||||||||||||| ||| || || |||||| ||| | | ||| | | |||| |
Sbjct 740862 TGGCCGCAGATCGTGC-CGCGTTTATCGATCAATCCCAATCTCTCAATATATACATGCAG 740804
Query 105863 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 105922
||||| || ||| |||||| | |||||| | || ||||| ||||||||||||
Sbjct 740803 AGTCCTACAATGGGCAAGCTGACCAGCATGCACTTTTATGGTTGGTCTAAGGGTCTCAAA 740744
Query 105923 ACGGGGATGTATTACCTCCGATCTAAGGCA-AAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981
|| || ||||||||| | || || ||||| |||| ||||| ||||||| | ||||
Sbjct 740743 ACCGGTATGTATTACTTGCGCACTCAGGCAGCTTCCGCG-CCAATCCAGTTCACTGTTGA 740685
Query 105982 ACCAGAA 105988
| ||||
Sbjct 740684 TCAAGAA 740678
>seq3
Length=2099697
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/142 (75%), Gaps = 4/142 (3%)
Strand=Plus/Plus
Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857
||||| ||||| || | || ||||| ||||||||| ||||||||||| || || |||
Sbjct 1027784 TTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTC 1027843
Query 94858 TGC--GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
|| || || | ||||| |||||||| || |||||||| ||||| || || || |
Sbjct 1027844 -GCAAGC-ATCTTCTGGCTAAAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATG 1027901
Query 94916 AGCTTATCTCTCGTGACGAGGG 94937
|||| || ||||| || || ||
Sbjct 1027902 AGCTAATTTCTCGCGATGAAGG 1027923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260770836960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |