Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 251 8e-62 seq3 84.2 3e-11 >seq1 Length=3734243 Score = 251 bits (278), Expect = 8e-62 Identities = 1156/1807 (64%), Gaps = 69/1807 (4%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||||||| ||||| | ||||| || | || || || |||||||| ||||| | || Sbjct 742454 CCCACAGCACATGATTATGCGTGTATCTATTGGAATCCATGGGGATGACATCCCTCGAGT 742395 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 |||||||| || || ||| ||| ||||||| ||||| | || ||| | | Sbjct 742394 TTTGGAGACTTATGAACTTATGAGCCAGAAGATGTTCACGCACGCCAGCCCTACCTTGTA 742335 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||||||||| || | || |||||| || ||| | | | |||| || Sbjct 742334 TAATGCTGGTACGCCTCAGGCGCAGATGTCCTCATGTTTCTTGGTTCAAATGCAGGATGA 742275 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||||| | || || || | || | | | ||||||| ||||| |||| ||||| Sbjct 742274 TTCAATTGAAGGGATTTACGATACGTTGAAGACTTGTGCGCTCATCTCTAAGTCTGCTGG 742215 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||||||| | | || || | | | || | || |||| || ||||| Sbjct 742214 GGGTATTGGTCTCAATATTCACAACATTCGCGCTACAGGCTCATATATTGCTGGAACAAA 742155 Query 104521 TGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 ||| | | || |||||||| | || ||| | || || | || ||||| || || | Sbjct 742154 CGGTACCAGCA-ATGGTATTTTGCCCATGTTGCGTGTGTACAATAATACAGCTCGATACG 742096 Query 104580 TAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | |||||| || | || ||| || ||||| | ||| | ||||| ||||| | Sbjct 742095 TGGATCAAGGCGGCAATAAGCGCCCGGGTGCTTTCGCAATTTATTTAGAGCCGTGGCATG 742036 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC- 104695 || | | ||||| |||| ||||| || || || | |||||| || ||| Sbjct 742035 ATGACGTATTTGAGTTTATTGATTTGCGGAAAAATCATGGAAAAGAGGAGATTCG-TGCG 741977 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || ||| | ||| ||||| |||||||||||| | ||||||||| | ||| | ||| | Sbjct 741976 CGAGATTTATTCCTTGCTCTATGGATTCCAGATTTGTTCATGAAGCGCGTTAAAGAGGAT 741917 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG---GGT 104812 || ||||| |||| | |||||| | | |||||||| |||| |||| ||| Sbjct 741916 GGAGATTGGACTCTTATGTGTCCAAGCGAATGTCCTGGTCTAGCCGA---CGTGTATGGT 741860 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTG 104872 || || || || | || ||||||||||||||| ||| | || | || || | Sbjct 741859 GACGAATTCGAGGAGCTGTACACAAAGTACGAG----AAGCTAGGTAAAGGTCGTCG-TA 741805 Query 104873 CCAGCT--GCCGATG---TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 ||| | || | ||||| | || ||||| | | ||||| ||||| |||| | Sbjct 741804 CCATCAAGGCACAAAAACTGTGGTACGCAATTCTTGAAGCCCAAACTGAGACAGGTAATC 741745 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 | || ||||| ||||| || || || | ||| ||| |||||||| |||||| | Sbjct 741744 CGTATATGCTCTACAAGGATGCTGCCAATCGTAAGTCTAACCAAAAGAACTTGGGTACAA 741685 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 |||||||||||||||| || || || | || || | | ||| || |||| Sbjct 741684 TCAAGAGTTCCAATCTTTGCTGCGAGATTGTCGAGTTCTCGAGCCCAGACGAAGTTGCTG 741625 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG------A 105101 | || ||| | || ||||||||||| |||| || | || | || | | | | Sbjct 741624 TTTGCAACTTGGCCTCAATCGCTCTTCCCAGCTACCTCGAGC-AGCGCGATGGTGGAGTA 741566 Query 105102 CATT-TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 | | | | | | ||| ||||| || || | || | | ||||| ||| | Sbjct 741565 CTCTATAACTTCGCAAAGCTCCATGATGTGGCTAAGGTTCTAGTTCGGAACCTCAACTGC 741506 Query 105161 GTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACAC 105217 ||||||| | || | ||||| ||| ||| |||||| || || ||| | || Sbjct 741505 ATTATTGAGAAGAACTACTACCCTGTTCCTGAG---GCTCGTCGCTCAAACATGCGCCAT 741449 Query 105218 CGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-- 105275 || || |||| ||| ||||| || ||| | || || ||||||||| | | ||| Sbjct 741448 CGCCCTATTGCTCTTGGTGTCCAAGGTTTGGCCGACA----CATTCTTTG-CTCTACGTT 741394 Query 105276 ---CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATC 105332 | || ||| | || ||| || ||||| | ||||||||||| || || | Sbjct 741393 TGCCGTTCGATAGCCCTGAGGCGCGCGAGCTCAATATTCAAATATTTGAGACAATATACC 741334 Query 105333 ACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392 |||||||| |||| || || |||| | || | ||||||| ||||| | | | Sbjct 741333 ACGCCGCTATTGAAGCTAGCGTAGAGCTAGCTGCTAGAGATGGTCACTATGAGTCTTATC 741274 Query 105393 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 105452 || || || |||||| | || ||| || ||||| | |||| ||| ||| | Sbjct 741273 CTGGATCGCCTGCTTCAGAGGGCCAGCTGCAGTTTGACCTCTGGG---GTGTTACCC--C 741219 Query 105453 TTCACTAC-----GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 105507 |||| | || ||||| | |||||| || ||| | || | || || Sbjct 741218 TTCAGATCTTTGGGATTGGGACACCCTCAAGTCGTCGATGGCTGAGCATGGGTTGCGCAA 741159 Query 105508 CAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 105567 | || || |||| |||||||| || || |||||| | || || ||||| |||||| Sbjct 741158 CTCGCTTCTTGTGGCACCAATGCCCACTGCTTCCACCTCCCAGATTTTGGGCTTTAATGA 741099 Query 105568 ATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGT 105627 |||||| || || |||||| | ||||| ||| | | | | || || ||||| Sbjct 741098 ATGCTTCGAGCCTTACACGTCAAACATTTATTCGCGTCGTGTTTTGGCAGGTGAGTTCCA 741039 Query 105628 GATTGTCAACAAGCAT---CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGA 105684 | || ||| || ||| |||| || || || || | ||| | | || Sbjct 741038 AGTCGTGAACCCATATTTGCTCAAGGATTTGGTCGAA---ATGGGATTGTGGAACGATGA 740982 Query 105685 TATGAAGGATCTCATGGT-GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAA 105743 |||||| | | || || | ||||| || || ||||| ||| | ||||| Sbjct 740981 CATGAAGAACCGTATCGTTGCTAGCGGA-GGATCAATTCAGTCTATCCCGTCAATTCCTG 740923 Query 105744 ATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACA 105803 ||||| | ||| || ||||| ||||| ||||| || | ||| | ||||||||| Sbjct 740922 ATGAACTGAAGCAGCTGTACAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCATTGACA 740863 Query 105804 TGGCCGCAGATCGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAA 105862 ||||||||||||||| ||| || || |||||| ||| | | ||| | | |||| | Sbjct 740862 TGGCCGCAGATCGTGC-CGCGTTTATCGATCAATCCCAATCTCTCAATATATACATGCAG 740804 Query 105863 AGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAA 105922 ||||| || ||| |||||| | |||||| | || ||||| |||||||||||| Sbjct 740803 AGTCCTACAATGGGCAAGCTGACCAGCATGCACTTTTATGGTTGGTCTAAGGGTCTCAAA 740744 Query 105923 ACGGGGATGTATTACCTCCGATCTAAGGCA-AAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 || || ||||||||| | || || ||||| |||| ||||| ||||||| | |||| Sbjct 740743 ACCGGTATGTATTACTTGCGCACTCAGGCAGCTTCCGCG-CCAATCCAGTTCACTGTTGA 740685 Query 105982 ACCAGAA 105988 | |||| Sbjct 740684 TCAAGAA 740678 >seq3 Length=2099697 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/142 (75%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 ||||| ||||| || | || ||||| ||||||||| ||||||||||| || || ||| Sbjct 1027784 TTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTC 1027843 Query 94858 TGC--GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || || || | ||||| |||||||| || |||||||| ||||| || || || | Sbjct 1027844 -GCAAGC-ATCTTCTGGCTAAAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATG 1027901 Query 94916 AGCTTATCTCTCGTGACGAGGG 94937 |||| || ||||| || || || Sbjct 1027902 AGCTAATTTCTCGCGATGAAGG 1027923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260770836960