Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1 185 1e-41 seq3 131 2e-25 >seq1 Length=3734243 Score = 185 bits (204), Expect = 1e-41 Identities = 1112/1758 (63%), Gaps = 64/1758 (4%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || ||||| || ||||| || || ||||||||||| ||| || || | |||||| || Sbjct 740721 GTGCGCAAGTAATACATACCGGTTTTGAGACCCTTAGACCAACCATAAAAGTGCATGCTG 740780 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | ||||||| ||| | || ||| |||| | || ||||| || ||||| || ||||| Sbjct 740781 GTCAGCTTGCCCATTGTAGGACTCTGCATGTATATATTGAGAGATTGGGATTGATCGATA 740840 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 |||| | || || || |||||||| |||| || || || ||||||||||| ||| Sbjct 740841 AACGCGGCACGATCTGCGGCCATGTCAATGATCGCTTTCTGGCTAATCTCCCAGACTGTC 740900 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGC---GCTTGTACGCTCCCACCGGCT 78426 ||| | |||||| || || | || | | | || | || ||| || Sbjct 740901 TTGTACAGCTGCTTCAGTTCATCAGGAATTGACGGGATAGACTGAATTGATCCTCCG-CT 740959 Query 78427 CGCA-CAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGA--AGATCCCGG 78483 ||| | || ||||| || | | |||||| | || ||| || | |||| | Sbjct 740960 AGCAACGATACGGTTCTTCATGTCATCGTTCCA-CAATCCCATTTC-GACCAAATCCTTG 741017 Query 78484 ACCAGGTGCCGGTTAATCATGAC---GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATG 78540 | || | |||| || ||| |||||| || |||| || ||| || ||| Sbjct 741018 AGCAAATATGGGTT---CACGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATG 741074 Query 78541 TTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTC 78600 || | |||||| |||||||| || || |||| ||||||| ||| || || || Sbjct 741075 TTTGACGTGTAAGGCTCGAAGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTG 741134 Query 78601 GGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC--CTTTA 78658 ||||| ||||| || || || || || || | |||||| || | ||||| ||| | Sbjct 741135 GGCATTGGTGCCACAAGAAGCGAGTTGCGCAACCCATGC-TCA-GCCATCGACGACTTGA 741192 Query 78659 GGCCGTCCCAAA---ATTCATTCGCCGCGATC---CCCCACATGTCCGGTTGAAGGATAC 78712 || ||||||| | || | | | | ||||| | ||| || || | Sbjct 741193 GGGTGTCCCAATCCCAAAGATCTGAAGGGGTAACACCCCAGAGGTCAAACTGCAGCTGGC 741252 Query 78713 CCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGC 78772 |||| || || ||||| || | | ||| || || || || | || || | || Sbjct 741253 CCTCTGAAGCAGGCGATCCAGGATAAGACTCATAGTGACCATC-TC--TAGC-AGCTAGC 741308 Query 78773 ATGACTCGAGC----AGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCG 78828 || | ||| | || |||||||| | | ||| || || | ||||||||| Sbjct 741309 TCTACGCTAGCTTCAATAGCGGCGTGGTATATTGTCTCAAATATTTGAATATTGAGCTCG 741368 Query 78829 CGCGCCTT-GGTCTCGTCGAACG--AAAGGCCGAGCATCATGAAGACATCGGCCAGGCCC 78885 ||||||| || || ||||||| ||| | ||||| | ||| ||||||| || Sbjct 741369 CGCGCCTCAGGGCTA-TCGAACGGCAAACGTAGAGCA--AAGAATGTGTCGGCCAAACCT 741425 Query 78886 TGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGG 78945 ||||| || | ||| || || || ||||||||||| || ||| | ||| Sbjct 741426 TGGACACCAAGAGCAATAGGGCGATGGCGCATGTTTGAGCGACGAGCCTCAGGAACAGGG 741485 Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005 || ||||| || || | || ||| ||||| || | ||| || ||| || | Sbjct 741486 TAGTAGTTCTTCTCAATAATGCAGTTGAGGTTCCGAACTAGAACCTTAGCCACATCATGG 741545 Query 79006 AATTTGGCGAAATCAAAATGATTTCCTT--------TGATGAAAGTCGGTAGGCACAGCG 79057 | || ||||| | | | | ||| || | | || | | || | |||| Sbjct 741546 AGCTTTGCGAAGTTATAGAGTACTCCACCATCGCGCTGCTCGAGGTAGCTGGGAAGAGCG 741605 Query 79058 AT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTG 79113 || |||| |||||| || || ||||| ||||| || | ||||| || || | Sbjct 741606 ATTGAGGCCAAGTTGCAAACAGCAACTTCGTCTGGGCTCGAGAACTCGACAATCTCGCAG 741665 Query 79114 CACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCG 79173 || | ||| || |||||| || || | |||||| ||||| ||| || || Sbjct 741666 CAAAGATTGGAACTCTTGATTGTACCCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCA 741725 Query 79174 TCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAG 79233 ||||||||| ||| ||||| | || |||||| || | |||| ||| ||| Sbjct 741726 TCCTTGTAGAGCATATACGGATTACCTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCAC 741785 Query 79234 A-----TGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGT 79288 | ||| || | | || || ||| |||| | | | | ||||| | || Sbjct 741786 AGTTTTTGTGCCTTGATGGTACGACGACCTT-TACCTAGCTTCT----CGTACTTTGTGT 741840 Query 79289 ACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACA 79348 ||| ||| | ||| | || ||||| || |||| || || || || ||| || |||| Sbjct 741841 ACAGCTCCTCGAATTCGTCACCATACACGTCGGCTAGACCAGGACATTCGCTTGGACACA 741900 Query 79349 TCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGG 79408 | || ||| || | |||| | ||| || |||||| | || || ||||| || | Sbjct 741901 TAAGAGTCCAATCTCCATCCTCTTTAACGCGCTTCATGAACAAATCTGGAATCCATAGAG 741960 Query 79409 CCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAA 79468 | ||| | || || ||| |||||||| | || || || |||| || | || Sbjct 741961 CAAGGAATAAATCTCGCGCACGAATCTCCTCTTTTCCATGATTTTTCCGCAAATCAATAA 742020 Query 79469 AGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGC 79528 | || | | ||| | ||||||||||| | ||| || ||||| | |||| |||||| Sbjct 742021 ACTCAAATACGTCATCATGCCACGGCTCTAAATAAATTGCGAAAGCACCCGGGCGCTTAT 742080 Query 79529 CGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGC 79588 |||||| || | ||||| || || || || ||| | || || | |||||||| || | Sbjct 742081 TGCCGCCTTGATCCACGTATCGAGCTGTATTATTGTACACACGCAACATGGGCAAAATAC 742140 Query 79589 CGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-G 79647 | | | | ||||| || || || || || | || |||||||| | | | Sbjct 742141 CATTGCTGGTACCGTTTGTTCCAGCAATATATGAGCCTGTAGCGCGAATGTT-GTGAATA 742199 Query 79648 TGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAG 79707 | || || || ||||| | |||| |||||| |||| || ||| | ||| ||||| Sbjct 742200 TTGAGACCAATACCCCCAGCAGACTTAGAGATGAGCGCACAAGTCTTCAACGTATCGTAA 742259 Query 79708 ATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTG 79767 || || || || || || |||| ||| |||| ||| || |||||||| | | Sbjct 742260 ATCCCTTCAATTGAATCATCCTGCATTTGAACCAAGAAACATGAGGACATCTGCGCCTGA 742319 Query 79768 TTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGA 79827 |||||| || || | | ||| || | ||||||||||| | ||| |||||||| || Sbjct 742320 GGCGTACCAGCATTATACAAGGTAGGGCTGGCGTGCGTGAACATCTTCTGGCTCATAAGT 742379 Query 79828 TCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATG 79887 || || |||||| || || |||| ||| || || ||||| || | | || ||||| Sbjct 742380 TCATAAGTCTCCAAAACTCGAGGGATGTCATCCCCATGGATTCCAATAGATACACGCATA 742439 Query 79888 AAGAGGTACTG-GGGCGT 79904 | | || ||| |||||| Sbjct 742440 ATCATGTGCTGTGGGCGT 742457 Score = 147 bits (162), Expect = 2e-30 Identities = 388/587 (66%), Gaps = 4/587 (1%) Strand=Plus/Minus Query 19133 GGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGACCTGATGAGCCAGAAG 19192 || |||||||| || ||| |||| ||||| ||||| || || || |||||||||||| Sbjct 742423 GGAATCCATGGGGATGACATCCCTCGAGTTTTGGAGACTTATGAACTTATGAGCCAGAAG 742364 Query 19193 TTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAACAACCCGCAGATGTCG 19252 | ||||||||||| | || ||| | | || || |||||| | |||||||||| Sbjct 742363 ATGTTCACGCACGCCAGCCCTACCTTGTATAATGCTGGTACGCCTCAGGCGCAGATGTCC 742304 Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 |||||| | || ||| ||||||| ||||| || || ||||| ||| | ||| Sbjct 742303 TCATGTTTCTTGGTTCAAATGCAGGATGATTCAATTGAAGGGATTTACGATACGTTGAAG 742244 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCACTGCTC-GAATATCCG 19371 || |||| |||||| |||| | |||||||| || | || | || || || || Sbjct 742243 ACTTGTGCGCTCATCTCTAAGTCTGCTGGGGGTATTGGTCT-CAATATTCACAACATTCG 742185 Query 19372 GTCGAGTGGTACACGAATCAATGGGACGAACGG-AGTAGCCGACGGTATCGTCCCAATGC 19430 | | || || || ||| || ||||| | || | | ||||| | || ||| Sbjct 742184 CGCTACAGGCTCATATATTGCTGGAACAAACGGTACCAG-CAATGGTATTTTGCCCATGT 742126 Query 19431 TCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCT 19490 | || || | ||| || || || | ||||| | || || ||| || ||| ||| Sbjct 742125 TGCGTGTGTACAATAATACAGCTCGATACGTGGATCAAGGCGGCAATAAGCGCCCGGGTG 742066 Query 19491 CGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCC 19550 | ||||| || || | ||||| ||||| | ||||| | || || | || |||| Sbjct 742065 CTTTCGCAATTTATTTAGAGCCGTGGCATGATGACGTATTTGAGTTTATTGATTTGCGGA 742006 Query 19551 TGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGG 19610 || || || | |||||||| || || || | ||| || | |||||||| | Sbjct 742005 AAAATCATGGAAAAGAGGAGATTCGTGCGCGAGATTTATTCCTTGCTCTATGGATTCCAG 741946 Query 19611 ACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAAT 19670 | | |||||| || ||| | |||| | ||| ||| || ||||| || ||||| Sbjct 741945 ATTTGTTCATGAAGCGCGTTAAAGAGGATGGAGATTGGACTCTTATGTGTCCAAGCGAAT 741886 Query 19671 GCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTAC 19717 | ||||| ||| ||||||| || || || | ||| | ||| ||||| Sbjct 741885 GTCCTGGTCTAGCCGACGTGTATGGTGACGAATTCGAGGAGCTGTAC 741839 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 ||||| | ||||||||||| ||||| ||||| || ||||| ||| || | | | Sbjct 1279099 CCTCAACATCTTTTCATGCGCGTCGCCGTCGGAATACATGGTTCTGACGTCGATAGGGCC 1279158 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||| || || || ||||||||||||| | || ||||| || ||||| || | ||| Sbjct 1279159 ATCGAAACCTATGATATGATGAGCCAGAAACTTTTTACGCATGCAACGCCCACTTTGTTC 1279218 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || |||| || | || || ||| || ||||| ||||| || |||| ||||||| Sbjct 1279219 AATTCCGGGACAGTAAGACCACAAATGGCGTCATGTTTTCTAGTTGCAATGATGGATGAC 1279278 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGC 19320 ||||| || || || | ||| ||| | ||| |||||| Sbjct 1279279 AGCATAGAAGGAATATTCGACACGTTGAAGCTGTGCGC 1279316 >seq3 Length=2099697 Score = 131 bits (144), Expect = 2e-25 Identities = 408/610 (67%), Gaps = 29/610 (5%) Strand=Plus/Plus Query 59825 TATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAG-- 59882 ||| ||||| ||||| ||||| ||| |||| || | | | ||||||||| ||||| Sbjct 1027633 TATTCACTCGGAGACTTACTCACTCCTGATTGACACATATATTAAGGATCCGAAAGAGGC 1027692 Query 59883 AAGGCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATG 59941 | || |||||| |||||| ||||| | ||| ||| | | |||| || | || Sbjct 1027693 ACAGCAC--CTGTTCAATGCCATTGAGACCATTCCCTGCATTGCTA-AAAAGGCTAAGTG 1027749 Query 59942 GGCCATGCAGTGGATGAGTCCTGGAGCATC---ATTTGCACAACGTCTCATAGCTTTTGC 59998 ||| ||| ||||| ||| | | | || ||||||| | || || | || ||||| Sbjct 1027750 GGCGTTGCGCTGGATCAGTGATCGCGAGTCCACATTTGCAGAGCGCCTTGTGGCGTTTGC 1027809 Query 59999 ATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057 ||| || || || ||||||||||| ||||| ||| || |||||||| || |||| Sbjct 1027810 -TGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTCGCAAGCATCTTCTGGCTAAAGAAGC 1027868 Query 60058 GTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCC 60117 | ||||||||||| || || | || || || ||||| ||||| || || || || | | Sbjct 1027869 GCGGCCTCATGCCTGGTCTTACATTTTCTAATGAGCTAATTTCTCGCGATGAAGGTATGC 1027928 Query 60118 ATCAGGAGTTTGCAGTGACGCTCTATTCACACCTATTGGAAAAATGCCCTTC-CAAG-GA 60175 || || ||||| || | || | ||||| | || ||||| |||| || | | || Sbjct 1027929 ATACTGATTTTGC-TTGCCTCT-TGTTCACGCACCTT-GAAAACCGCCCGTCGCGTGAGA 1027985 Query 60176 T-ATTCACAAGATTGTTCAGTG-GGCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCG 60233 | || | |||| ||| || ||| ||| | |||| || ||| |||| || ||| Sbjct 1027986 TCATCGAGCGGATT-ATCACTGAGGCGGTTGAGATCGAGAAGGAATTCCTCACTGATGCG 1028044 Query 60234 CTTCCATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTC 60293 || || || | || ||| | || ||| ||||||||| |||| || Sbjct 1028045 CTCCCCGTATCTCTTTTGGGCATGAATGCAAAGCTCATGTGCCAGTACATTGAGTTCGTT 1028104 Query 60294 GCGGACCGC---CTCATGGCCCAGTTTGGAGAAGGACCAA--TTTACGGCGTGAATAACC 60348 || |||||| ||| |||| | |||| | |||| | ||| |||| |||| Sbjct 1028105 GCCGACCGCTTGCTCGTGGCTC---TTGGCCA--TCCCAAGGTGTACAGCGTTGCGAACC 1028159 Query 60349 CTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGG 60408 | || || | ||||||| |||||| | | || ||||||||||||||||||||||| | Sbjct 1028160 CCTTTGATTTCATGGAGAATATCTCGCTTGCGGGTAAGACCAACTTCTTTGAGAAGCGAG 1028219 Query 60409 TCGGGGATTA 60418 || ||| || Sbjct 1028220 TCTCGGACTA 1028229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524772573760