Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=3734243 Score = 127 bits (140), Expect = 2e-24 Identities = 326/491 (66%), Gaps = 4/491 (1%) Strand=Plus/Minus Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269 || ||||| || || ||| | | || || ||||| || || | |||||||| ||| Sbjct 742423 GGAATCCATGGGGATGACATCCCTCGAGTTTTGGAGACTTATGAACTTATGAGCCAGAAG 742364 Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 || |||||||||| || ||| ||| || ||||||||| ||| | |||||||| Sbjct 742363 ATGTTCACGCACGCCAGCCCTACCTTGTATAATGCTGGTACGCCTCAGGCGCAGATGTCC 742304 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 || ||| |||| ||| ||||||| || || || || || ||||| ||| | ||| Sbjct 742303 TCATGTTTCTTGGTTCAAATGCAGGATGATTCAATTGAAGGGATTTACGATACGTTGAAG 742244 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 ||||| | |||||| |||| | || ||||| ||| || | | | | ||| | || Sbjct 742243 ACTTGTGCGCTCATCTCTAAGTCTGCTGGGGGTATTGGTCTCAATATTCAC-AACATTCG 742185 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508 || | ||| || || || || ||||| | | |||| || |||| ||| | Sbjct 742184 CGCTACAGGCTCATATATTGCTGGAACAAACGGTACCAGCAATGGTATTTTGCCCATGTT 742125 Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTC 53568 || || | ||| || || || || ||||| | || || || |||||| ||| | Sbjct 742124 GCGTGTGTACAATAATACAGCTCGATACGTGGATCAAGGCGGCAATAAGCGCCCGGGTGC 742065 Query 53569 GTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCT 53628 ||||| || || | ||||||||||| | ||| | | |||||| | || |||| Sbjct 742064 TTTCGCAATTTATTTAGAGCCGTGGCATGATGACGTATTTGAGTTTATTGATTTGCGGAA 742005 Query 53629 GAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGG 53687 ||||| || | || ||||| || ||| || || | || ||||| |||||||| | Sbjct 742004 AAATCATGGAAAAGAGGAGATTCG-TGCGCGAGATTTATTCCTTGCTCTATGGATTCCAG 741946 Query 53688 ACCTCTTCATG 53698 | | |||||| Sbjct 741945 ATTTGTTCATG 741935 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786 || ||| || | ||| ||| || ||||||||| ||||| | ||||||||| Sbjct 740917 CTGAAGCAGCTGTACAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCATTGACATGGCC 740858 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || ||||||| |||| ||||| || ||||| ||||| || || | |||| ||| |||| Sbjct 740857 GCAGATCGTGCCGCGTTTATCGATCAATCCCAATCTCTCAATATATACATGCAGAGTCCT 740798 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 || ||| |||| ||| | ||||||||||| || ||| ||||| ||||| || ||| Sbjct 740797 ACAATGGGCAAGCTGACCAGCATGCACTTTTATGGTTGGTCTAAGGGTCTCAAAACCGGT 740738 Query 55907 ATGTACTATCTGCGGAC 55923 ||||| || |||| || Sbjct 740737 ATGTATTACTTGCGCAC 740721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215972639200