Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
>seq1
Length=3734243
Score = 127 bits (140), Expect = 2e-24
Identities = 326/491 (66%), Gaps = 4/491 (1%)
Strand=Plus/Minus
Query 53210 GGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGACTTAATGAGCCAAAAG 53269
|| ||||| || || ||| | | || || ||||| || || | |||||||| |||
Sbjct 742423 GGAATCCATGGGGATGACATCCCTCGAGTTTTGGAGACTTATGAACTTATGAGCCAGAAG 742364
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
|| |||||||||| || ||| ||| || ||||||||| ||| | ||||||||
Sbjct 742363 ATGTTCACGCACGCCAGCCCTACCTTGTATAATGCTGGTACGCCTCAGGCGCAGATGTCC 742304
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||| |||| ||| ||||||| || || || || || ||||| ||| | |||
Sbjct 742303 TCATGTTTCTTGGTTCAAATGCAGGATGATTCAATTGAAGGGATTTACGATACGTTGAAG 742244
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448
||||| | |||||| |||| | || ||||| ||| || | | | | ||| | ||
Sbjct 742243 ACTTGTGCGCTCATCTCTAAGTCTGCTGGGGGTATTGGTCTCAATATTCAC-AACATTCG 742185
Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508
|| | ||| || || || || ||||| | | |||| || |||| ||| |
Sbjct 742184 CGCTACAGGCTCATATATTGCTGGAACAAACGGTACCAGCAATGGTATTTTGCCCATGTT 742125
Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTC 53568
|| || | ||| || || || || ||||| | || || || |||||| ||| |
Sbjct 742124 GCGTGTGTACAATAATACAGCTCGATACGTGGATCAAGGCGGCAATAAGCGCCCGGGTGC 742065
Query 53569 GTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCT 53628
||||| || || | ||||||||||| | ||| | | |||||| | || ||||
Sbjct 742064 TTTCGCAATTTATTTAGAGCCGTGGCATGATGACGTATTTGAGTTTATTGATTTGCGGAA 742005
Query 53629 GAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACAGCTCTGTGGATTCCGG 53687
||||| || | || ||||| || ||| || || | || ||||| |||||||| |
Sbjct 742004 AAATCATGGAAAAGAGGAGATTCG-TGCGCGAGATTTATTCCTTGCTCTATGGATTCCAG 741946
Query 53688 ACCTCTTCATG 53698
| | ||||||
Sbjct 741945 ATTTGTTCATG 741935
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786
|| ||| || | ||| ||| || ||||||||| ||||| | |||||||||
Sbjct 740917 CTGAAGCAGCTGTACAAGACAGTCTGGGAGATTAGCCAGAAAGCGATCATTGACATGGCC 740858
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| ||||||| |||| ||||| || ||||| ||||| || || | |||| ||| ||||
Sbjct 740857 GCAGATCGTGCCGCGTTTATCGATCAATCCCAATCTCTCAATATATACATGCAGAGTCCT 740798
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
|| ||| |||| ||| | ||||||||||| || ||| ||||| ||||| || |||
Sbjct 740797 ACAATGGGCAAGCTGACCAGCATGCACTTTTATGGTTGGTCTAAGGGTCTCAAAACCGGT 740738
Query 55907 ATGTACTATCTGCGGAC 55923
||||| || |||| ||
Sbjct 740737 ATGTATTACTTGCGCAC 740721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215972639200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |