Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
seq3 120 3e-22
>seq2
Length=2224469
Score = 150 bits (166), Expect = 2e-31
Identities = 172/229 (75%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || |||||||| || |||||||| ||||| || ||||||||| || |
Sbjct 961341 ATGCAGATTTTCGTGAAGACGCTAACGGGCAAGACCATTACGCTCGAGGTTGAG--AGTT 961398
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||||| | | ||| || ||| || |||||||| || || || ||||
Sbjct 961399 CGGATACCATTGACGCTGTCAAGAGCAAGATTGCCGATAAGGAGGGCATCCCCCCTGACC 961458
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||||| || |||||||| ||||| || ||||||| |||||||| | ||||| |
Sbjct 961459 AGCAGCGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGTACCCTCTCGGACTACA 961518
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| | |||||||| || ||||| || || || | || || || |||||
Sbjct 961519 ATATTCAAAAGGAGTCGACTCTACACCTTGTGCTTCGCCTCCGTGGTGG 961567
>seq3
Length=2099697
Score = 120 bits (132), Expect = 3e-22
Identities = 364/560 (65%), Gaps = 12/560 (2%)
Strand=Plus/Plus
Query 64297 TTCCCAATTAGGTACCCTGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGG 64356
|| || || ||||||| ||| | ||| || || |||||||| || |||||||
Sbjct 1027367 TTTCCTATCAGGTACCATGAAATTTGGCAGGCGTATAAGAAAGCGGAGGCCTCTTTCTGG 1027426
Query 64357 ACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACC---TAAACTCA 64413
|| | ||| ||| ||||||||| |||||| | | |||||||| || | | |||
Sbjct 1027427 ACTGCCGAAGAGATTGATCTCGGTAAGGATTTGAATGACTGGGACAATCGCATGAACA-- 1027484
Query 64414 CAGGAACAGCACTTCATCAAGTTG---GTCCTAGCATTCTTCGCATCAAGTGACGGAATT 64470
|||| ||| ||| ||| | | || || ||||| |||||| | ||||| |||
Sbjct 1027485 -AGGATGAGCGATTCTTCATTTCGAATGTACTCGCATTTTTCGCAGCCTCCGACGGCATT 1027543
Query 64471 GTGTTTGAGAATTTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCA 64530
|| ||||| ||| || | || || || ||||| ||||| ||
Sbjct 1027544 GTCAACGAGAACCTGGTTGAGCGGTTCTCTGGTGAAGTGCAAATCCCTGAGGCAAAGTGT 1027603
Query 64531 TTCTATGCGTATCAGGGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATT 64590
|| |||| | || | | || | |||||| ||||| || || ||| |||||
Sbjct 1027604 TTTTATGGATTCCAAATCATGATGGAGAATATTCACTCGGAGACTTACTCACTCCTGATT 1027663
Query 64591 GACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTA 64650
|||| | | || |||||| ||| | ||||||| || || ||||| |
Sbjct 1027664 GACACATATATTAAGGATCCGAAAGAGGCACAGCACCTGTTCAATGCCATTGAGACCATT 1027723
Query 64651 CCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGA---ATCGTGGGTCGTCG 64707
||| || ||||||||||| | ||||| | || ||||| | |||| | ||| |
Sbjct 1027724 CCCTGCATTGCTAAAAAGGCTAAGTGGGCGTTGCGCTGGATCAGTGATCGCGAGTCCACA 1027783
Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767
|||| |||| || | || ||||| ||| || || || ||||| || || || |||
Sbjct 1027784 TTTGCAGAGCGCCTTGTGGCGTTTGCTGCTGTTGAGGGGATCTTCTTCTCAGGCTCTTTC 1027843
Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827
|| ||||||||||| ||||| ||||| ||||| ||||| | ||||| || |||
Sbjct 1027844 GCAAGCATCTTCTGGCTAAAGAAGCGCGGCCTCATGCCTGGTCTTACATTTTCTAATGAG 1027903
Query 64828 CTGATCTCTCGGGACGAGGG 64847
|| || ||||| || || ||
Sbjct 1027904 CTAATTTCTCGCGATGAAGG 1027923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310371484480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |