Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 seq1 109 1e-18 >seq2 Length=2224469 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| ||||| || || ||||| | |||||| || | | || | ||||| Sbjct 961552 AGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGAGAGGGTACGTCCATCC 961493 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||| |||||||| || || ||||| || || || || ||||| || Sbjct 961492 TCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCG 961433 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| ||| ||||| || ||||| || || | || || || | ||| || ||| Sbjct 961432 GCAATCTTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAACCTCGAGCGTAATGGTC 961373 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || || | ||| | ||||| Sbjct 961372 TTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341 >seq1 Length=3734243 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || ||||| || || || || ||||||| ||||| || | | || Sbjct 2696325 ACGAAGGCGAAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGAGAGCGT 2696266 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || ||||| || ||||| || || || || || ||||| Sbjct 2696265 ACGGCCATCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGGGATACC 2696206 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||| ||||| ||| || || ||||| || || || |||| || || | Sbjct 2696205 CTCTTTGTCGGCAATCTTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGACCTCAAG 2696146 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||||||||| | || || | ||| | ||||| || Sbjct 2696145 AGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATCTT 2696101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531138882776