Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 3e-49
seq3 136 5e-27
>seq1
Length=3734243
Score = 210 bits (232), Expect = 3e-49
Identities = 1035/1632 (63%), Gaps = 39/1632 (2%)
Strand=Plus/Plus
Query 76770 TTCTT-ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACAT 76828
||||| ||| | || ||||| ||||| | || || | | || || | || |||||
Sbjct 740678 TTCTTGATCAACAGTGAACTGGATTGGCGCGGAAGCTGCCTGAGTGCGCAAGTAATACAT 740737
Query 76829 ACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACT 76888
||| ||||| |||||| | ||| || || || |||||||| ||||| ||| |
Sbjct 740738 ACCGGTTTTGAGACCCTTAGACCAACCATAAAAGTGCATGCTGGTCAGCTTGCCCATTGT 740797
Query 76889 AGGA-TCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAG 76947
|||| || || || | ||||| | || || ||||||||| || || | | ||| |
Sbjct 740798 AGGACTCTGC-ATGTATATATTGAGAGATTGGGATTGATCGATAAACGCGGCACGATCTG 740856
Query 76948 CCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 77007
| ||||| | || || | || || ||| ||||| | || ||| | | || || |
Sbjct 740857 CGGCCATGTCAATGATCGCTTTCTGGCTAATCTCCCAGACTGTCTTGTACAGCTGCTTCA 740916
Query 77008 TATCATCTGGAAGGTTTG------TATTTTGAATGGAACCACCATCTGATATAATTGTAT 77061
||||| |||| ||| || ||||| || || || | | || |
Sbjct 740917 GTTCATCAGGAA---TTGACGGGATAGACTGAATTGATCCTCCGCTAGCAACGATACGGT 740973
Query 77062 TCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAA 77121
|||| || ||||| ||||||||| | | || ||| | | || | || || || |
Sbjct 740974 TCTTCATGTCATCGTTCCACAATCCCATTTCGACCAAATCCTTGAGCAAATATGGGTTCA 741033
Query 77122 CTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCA 77181
| | ||| || || || | ||| || | ||| | ||||| || || || || || |
Sbjct 741034 CGACTTGGAACTCACCTGCCAAAACACGACGCGAATAAATGTTTGACGTGTAAGGCTCGA 741093
Query 77182 CAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATA 77241
||||||| |||||||| || | || |||||||| ||||| |||||||| || |
Sbjct 741094 AGCATTCATTAAAGCCCAAAATCTGGGAGGTGGAAGCAGTGGGCATTGGTGCCAC-AAGA 741152
Query 77242 AACTATTTCTGAGACCATGTGTTCTGATTTTATCT--TTTAGATATTTCCAATCCCAAAG 77299
| | | || | ||| || || | | | || || | ||||||||||||
Sbjct 741153 AGCGAGTTGCGCAACCCA-TGCTCAGCCATCGACGACTTGAGGGTGTCCCAATCCCAAAG 741211
Query 77300 ATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCC 77359
||||||||| |||| |||| || || | || || || | |||| |||||
Sbjct 741212 ATCTGAAGGGGTAACACCCCAGAGGTCAAACTGCAGCTGGCCCTCTGAAGCAGGCGATCC 741271
Query 77360 ATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCC 77419
| ||| | ||||| | || ||| | ||||||| || || ||||| | || |
Sbjct 741272 AGGATAAGACTCATAGTGACCATCTCTAGCAGCTAGCTCTACGCTAGCTTCAATAGCGGC 741331
Query 77420 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGG 77479
|| || ||||| || || || | ||||||| || | || ||| ||||| |||||
Sbjct 741332 GTGGTATATTGTCTCAAATATTTGAATATTGAGCTCGCGCGCCTCAGGGCTATCGAACGG 741391
Query 77480 ATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATG 77539
|| ||| | || || | || || || || || || |||| | ||||||| | |||
Sbjct 741392 CAAACGTAGAGCAAAGAATGTGTCGGCCAAACCTTGGACACCAAGAGCAATAGGGCGATG 741451
Query 77540 TCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT 77599
| | | || || ||| || |||| ||| || || || | || ||||| ||
Sbjct 741452 GCGCATGTTTGAGCGACGAGCCTCAGGAACAGGGTAGTAGTTCTTCTCAATAATGCAGTT 741511
Query 77600 GAGATTTCTAACAACTACTTTAACCACGTC------CTTT----AGTTTAAGAAAA-TCA 77648
||| || | ||| | || ||| |||| || |||| |||| ||| | ||
Sbjct 741512 GAGGTTCCGAACTAGAACCTTAGCCACATCATGGAGCTTTGCGAAGTTATAGAGTACTCC 741571
Query 77649 A--ATCTTCCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTA 77706
| ||| | || | | | || | ||| || || || | || ||||| || |
Sbjct 741572 ACCATCGCGCTGCTCGAGGTAGC-TGGGAAGAGCGATTGAGGCCAAGTTGCAAACAGCAA 741630
Query 77707 CCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGC 77766
| || | | | | | | | | |||||| || ||||| || ||||| || |
Sbjct 741631 CTTCGTCTGGGCTCGAGAACTCGACAATCTCGCAGCAAAGATTGGAACTCTTGATTGTAC 741690
Query 77767 CCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCC 77826
||| || | |||||| ||| |||| | ||||| || || ||| ||||| | |
Sbjct 741691 CCAAGTTCTTTTGGTTAGACTTACGATTGGCAGCATCCTTGTAGAGCATATACGGATTAC 741750
Query 77827 CGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATA---- 77882
| || ||| | || | ||| | ||| | | ||| | | || || || ||
Sbjct 741751 CTGTCTCAGTTTGGGCTTCAAGAATTGCGTACCACAGTTTTTGTGCCTTGATGGTACGAC 741810
Query 77883 GATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAA 77942
|| | || ||| || | || || | || || ||| || ||||| || || |
Sbjct 741811 GACCTTTA---CCTAGCT-TCTCGTACTTTGTGTACAGCTCCTCGAATTCGTCACCATAC 741866
Query 77943 ACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTA 78002
|| || | | ||||| ||||| |||| ||||| | | ||| || ||||| || |||
Sbjct 741867 ACGTCGGCTAGACCAGGACATTCGCTTGGACACATAAGAGTCCAATCTCCATCCTCTTTA 741926
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|| || ||||| || | ||| || ||||||||||||| |||| |||||| | | |
Sbjct 741927 ACGCGCTTCATGAACAAATCTGGAATCCATAGAGCAAGGAATAAATCTCGCGCACGAATC 741986
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || ||||| ||| || | ||| | |||||| | | ||| |||||| ||
Sbjct 741987 TCCTCTTTTCCATGATTTTTCCGCAAATCAATAAACTCAAATACGTCATCATGCCACGGC 742046
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182
|||| ||| ||||| | | | || || || ||||| || || ||||| | |||| ||
Sbjct 742047 TCTAAATAAATTGCGAAAGCACCCGGGCGCTTATTGCCGCCTTGATCCACGTATCGAGCT 742106
Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242
|| ||||| || || | |||||| || | |||||| || || || |||||||||| |
Sbjct 742107 GTATTATTGTACACACGCAACATGGGCAAAATACCATTGCTGGTACCGTTTGTTCCAGCA 742166
Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302
||||| || | |||||||| || ||| | || || || || || ||||
Sbjct 742167 ATATATGAGCCTGTAGCGCGAATGTTGTGAATATTGAGACCAATACCCCCAGCAGACTTA 742226
Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362
|| || || || ||| ||||| |||||||| || || || || |||||| |||
Sbjct 742227 GAGATGAGCGCACAAGTCTTCAACGTATCGTAAATCCCTTCAATTGAATCATCCTGCATT 742286
Query 78363 TTAA-GAAGAAA 78373
| || ||||||
Sbjct 742287 TGAACCAAGAAA 742298
>seq3
Length=2099697
Score = 136 bits (150), Expect = 5e-27
Identities = 383/587 (65%), Gaps = 6/587 (1%)
Strand=Plus/Minus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
|| ||||||||| ||| | ||||||||| | | ||||| || ||||||||||| |||
Sbjct 1027944 CAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAAAATGTAAGA 1027885
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || || || || || ||||| || || |||||||| || || |||||
Sbjct 1027884 CCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCTGAGAAGAAG 1027825
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG---TTGTGT 48317
|| || || || || ||||| || ||| | |||| | | ||| ||| |
Sbjct 1027824 ATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCGCGATCACTG 1027765
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377
||||| || ||||| | |||||| || | || || || || || || |||||
Sbjct 1027764 ATCCAGCGCAACGCCCACTTAGCCTTTTTAGCAATGCAGGGAATGGTCTCAATGGCATTG 1027705
Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATT 48437
|| || | | || || ||| |||| || || || || | || || |
Sbjct 1027704 AACAGGTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAATCAGGAGTGAGTAAGTC 1027645
Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497
|| ||||||||||| || || || || ||||| |||||||| | || || | |||
Sbjct 1027644 TCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACACTTTGCCTCAGGGATT 1027585
Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557
|| || || | | || || ||| ||| ||||| || || || || || || ||
Sbjct 1027584 TGCACTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATGCCGTCGGAGGCTGCG 1027525
Query 48558 AAAAATGCTAATACATGTTTAATAAAATAT---TTTTCGTTGGAAGTCAGTTTATTCCAG 48614
|||||||| | ||||| ||| || || | || ||| | | || | ||||
Sbjct 1027524 AAAAATGCGAGTACATTCGAAATGAAGAATCGCTCATCCTTGTTCATGCGATTGTCCCAG 1027465
Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674
||||| | ||| || | ||| | ||||| || ||||| || || ||||| |||||
Sbjct 1027464 TCATTCAAATCCTTACCGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCCTCCGCTTTC 1027405
Query 48675 TTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|||||| | ||| || ||| ||| ||| || || | |||||
Sbjct 1027404 TTATACGCCTGCCAAATTTCATGGTACCTGATAGGAAATAGTACAAA 1027358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668765266560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |