Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 156 9e-33 seq2 136 8e-27 seq3 95.1 3e-14 >seq1 Length=3734243 Score = 156 bits (172), Expect = 9e-33 Identities = 176/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| || || || | || || ||||||||||||||||| | Sbjct 2696331 ACCACCACGAAGGCGAAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGA 2696272 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| |||||||| || | || || ||||| || || | || || || ||| || Sbjct 2696271 GAGCGTACGGCCATCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGG 2696212 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||||||| ||||| ||| ||||| || |||| |||||| || |||||| ||||| Sbjct 2696211 GATACCCTCTTTGTCGGCAATC-TTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGA 2696153 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 | || |||||||| ||||| ||||| | ||||| ||||| |||||||| ||| Sbjct 2696152 CCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATCTTC 2696100 >seq2 Length=2224469 Score = 136 bits (150), Expect = 8e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| || || |||| || || ||||| || |||||||| | Sbjct 961568 ACCACCACGGAGGCGAAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGA 961509 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||||||||| || || || |||||||| | ||| || |||||| || Sbjct 961508 GAGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGG 961449 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || |||||||| || ||| ||||| || || | || || || |||||| || | Sbjct 961448 GATGCCCTCCTTATCGGCAATC-TTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAA 961390 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| || || ||||| ||||| | ||||| ||||| |||||||| Sbjct 961389 CCTCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341 >seq3 Length=2099697 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/204 (71%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCC 317040 || |||| || ||||| || || | || || || ||||| || |||||| ||||| Sbjct 1705000 CCATCGATATCGTGCTCGACGTAAACGGTCTTTAGCTCATCCTGCGACGGGAAGCCTTCA 1705059 Query 317041 AACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAA 317100 | ||| || | |||| || | ||| || |||||||| ||||||||||| || || || Sbjct 1705060 ACCTGGCCCTCAGCAATAGCACGCATAAGCGTCGACTTACCAGCACCATTAGGACCACAG 1705119 Query 317101 AGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTA 317157 ||||| || || ||| ||||| ||| | | || ||| || ||||||||| Sbjct 1705120 AGACCGTAGCGGCGGTTT---TTCTTTAGACGCAGCTGAGTACGGTTGAGTAGAATCTTA 1705176 Query 317158 CCACCATATGCCAGAGAGAACTCA 317181 |||| || || |||||||||||| Sbjct 1705177 GCACCGTAGGCAAGAGAGAACTCA 1705200 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 315664 ACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCC 315723 || || || || |||||||||| | ||| | | ||||| ||| ||||| || Sbjct 1703650 ACAACACCGCCCTCGAAATTCTTGATAGCCCTGGAGAGAGCACCAAGAGAATCGCGATCA 1703709 Query 315724 ACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCAT-AGAGCGGCGCC 315782 | | ||||||| ||||||||||| ||||| ||||| || |||||||| | || ||| Sbjct 1703710 AGATAGTTGGTAGGCTCATCAAGGACGATAACGTGCGGACGTTGCCATGTGCACGCTGCC 1703769 Query 315783 GATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAG 315835 || || ||||| | || || ||||| || || ||||| ||||| || |||| Sbjct 1703770 AAT-ACAAGCTTGACCTTCTGGCCACCTGAAAGACCACGAATGCGGGAGTGAG 1703821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739146354616