Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1 156 9e-33
seq2 136 8e-27
seq3 95.1 3e-14
>seq1
Length=3734243
Score = 156 bits (172), Expect = 9e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| |||||||| || || || | || || ||||||||||||||||| |
Sbjct 2696331 ACCACCACGAAGGCGAAGCACTAGGTGAAGTGTAGACTCCTTTTGGATGTTGTAGTCCGA 2696272
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| |||||||| || | || || ||||| || || | || || || ||| ||
Sbjct 2696271 GAGCGTACGGCCATCTTCCAACTGCTTGCCGGCGAAAATGAGTCGCTGCTGATCAGGAGG 2696212
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|||||||| ||||| ||| ||||| || |||| |||||| || |||||| |||||
Sbjct 2696211 GATACCCTCTTTGTCGGCAATC-TTGCTCTTAACGGCATCGATCGTATCCGAACTTTCGA 2696153
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
| || |||||||| ||||| ||||| | ||||| ||||| |||||||| |||
Sbjct 2696152 CCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATCTTC 2696100
>seq2
Length=2224469
Score = 136 bits (150), Expect = 8e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| |||||||| || || |||| || || ||||| || |||||||| |
Sbjct 961568 ACCACCACGGAGGCGAAGCACAAGGTGTAGAGTCGACTCCTTTTGAATATTGTAGTCCGA 961509
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || ||||||||||| || || || |||||||| | ||| || |||||| ||
Sbjct 961508 GAGGGTACGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGGGG 961449
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| |||||||| || ||| ||||| || || | || || || |||||| || |
Sbjct 961448 GATGCCCTCCTTATCGGCAATC-TTGCTCTTGACAGCGTCAATGGTATCCGAACTCTCAA 961390
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| ||||| || || ||||| ||||| | ||||| ||||| ||||||||
Sbjct 961389 CCTCGAGCGTAATGGTCTTGCCCGTTAGCGTCTTCACGAAAATCTGCAT 961341
>seq3
Length=2099697
Score = 95.1 bits (104), Expect = 3e-14
Identities = 144/204 (71%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCC 317040
|| |||| || ||||| || || | || || || ||||| || |||||| |||||
Sbjct 1705000 CCATCGATATCGTGCTCGACGTAAACGGTCTTTAGCTCATCCTGCGACGGGAAGCCTTCA 1705059
Query 317041 AACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAA 317100
| ||| || | |||| || | ||| || |||||||| ||||||||||| || || ||
Sbjct 1705060 ACCTGGCCCTCAGCAATAGCACGCATAAGCGTCGACTTACCAGCACCATTAGGACCACAG 1705119
Query 317101 AGACCATA---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTA 317157
||||| || || ||| ||||| ||| | | || ||| || |||||||||
Sbjct 1705120 AGACCGTAGCGGCGGTTT---TTCTTTAGACGCAGCTGAGTACGGTTGAGTAGAATCTTA 1705176
Query 317158 CCACCATATGCCAGAGAGAACTCA 317181
|||| || || ||||||||||||
Sbjct 1705177 GCACCGTAGGCAAGAGAGAACTCA 1705200
Score = 84.2 bits (92), Expect = 5e-11
Identities = 124/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 315664 ACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCC 315723
|| || || || |||||||||| | ||| | | ||||| ||| ||||| ||
Sbjct 1703650 ACAACACCGCCCTCGAAATTCTTGATAGCCCTGGAGAGAGCACCAAGAGAATCGCGATCA 1703709
Query 315724 ACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCAT-AGAGCGGCGCC 315782
| | ||||||| ||||||||||| ||||| ||||| || |||||||| | || |||
Sbjct 1703710 AGATAGTTGGTAGGCTCATCAAGGACGATAACGTGCGGACGTTGCCATGTGCACGCTGCC 1703769
Query 315783 GATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGAG 315835
|| || ||||| | || || ||||| || || ||||| ||||| || ||||
Sbjct 1703770 AAT-ACAAGCTTGACCTTCTGGCCACCTGAAAGACCACGAATGCGGGAGTGAG 1703821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739146354616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |