Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016-
03-01] 4 sequences; 8,470,812 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
>seq3
Length=2099697
Score = 93.3 bits (102), Expect = 4e-14
Identities = 294/452 (65%), Gaps = 14/452 (3%)
Strand=Plus/Minus
Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559
||||| | || ||||||||| ||| | |||||||| | | ||| | |||||||||
Sbjct 1027953 AACAAGAGGCAAGCAAAATCAGTATGCATACCTTCATCGCGAGAAATTAGCTCATTAGAA 1027894
Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619
||||| | || ||||| | || || || || | ||| || || || || || ||
Sbjct 1027893 AATGTAAGACCAGGCATGAGGCCGCGCTTCTTTAGCCAGAAGATGCTTGCGAAAGAGCCT 1027834
Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679
|| ||||| || ||||||||||| ||||| |||||||| || ||||||| | |
Sbjct 1027833 GAGAAGAAGATCCCCTCAACAGCAGCAAACGCCACAAGGCGCTCTGCAAATGTGGACTCG 1027774
Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACA---CACTCAATTGTT 23736
|||| ||||| | ||| |||||||| ||| || || ||| ||
Sbjct 1027773 CGATCACTGATCCAGCGCAACGCCCACTTAGCCTT---TTTAGCAATGCAGGGAATGGTC 1027717
Query 23737 TCAATTGCTTTTAAGAGAAAAGT-TTTTTCTTCATT---ATCTGTTATATATGTATCAAT 23792
||||| || || || || || | | | || || ||| | |||||||| |||||
Sbjct 1027716 TCAATGGCATTGAACAG----GTGCTGTGCCTCTTTCGGATCCTTAATATATGTGTCAAT 1027661
Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852
|| | || | || || |||||||| || || || || || |||||||||||
Sbjct 1027660 CAGGAGTGAGTAAGTCTCCGAGTGAATATTCTCCATCATGATTTGGAATCCATAAAAACA 1027601
Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912
| || |||| | ||| || ||| | | || | | | | | || ||||| |||||
Sbjct 1027600 CTTTGCCTCAGGGATTTGCACTTCACCAGAGAACCGCTCAACCAGGTTCTCGTTGACAAT 1027541
Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACAT 23944
|| || || || || || || || ||||
Sbjct 1027540 GCCGTCGGAGGCTGCGAAAAATGCGAGTACAT 1027509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487973925600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |