Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamiella_20domercqiae_20[genbank_20GCA_5F001599275.1_202016- 03-01] 4 sequences; 8,470,812 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 138 3e-27 seq2 111 4e-19 >seq1 Length=3734243 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || ||||| || ||||| ||||| || || Sbjct 2696107 CAGATTTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAAAGTTCGGAT 2696166 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||| || |||||| |||||||| || |||||||| || ||||| Sbjct 2696167 ACGATCGATGCCGTTAAGAGCAAGATTGCCGACAAAGAGGGTATCCCTCCTGATCAGCAG 2696226 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| || |||||||| || ||| | |||||||| | || || | || || ||| || Sbjct 2696227 CGACTCATTTTCGCCGGCAAGCAGTTGGAAGATGGCCGTACGCTCTCGGACTACAACATC 2696286 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || ||||| || || || Sbjct 2696287 CAAAAGGAGTCTACACTTCACCTAGT 2696312 >seq2 Length=2224469 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || || || || || |||||||| || || || || Sbjct 961344 CAGATTTTCGTGAAGACGCTAACGGGCAAGACCATTACGCTCGAGGTTGAGAGTTCGGAT 961403 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| |||||| || || || || ||||| || |||||||| Sbjct 961404 ACCATTGACGCTGTCAAGAGCAAGATTGCCGATAAGGAGGGCATCCCCCCTGACCAGCAG 961463 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||| || |||||| | || || | || || || | Sbjct 961464 CGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGTACCCTCTCGGACTACAATATT 961523 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || ||||| Sbjct 961524 CAAAAGGAGTCGACTCTACACCTTGT 961549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731138308776