Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq185 179 4e-40 >seq185 Length=130276 Score = 179 bits (198), Expect = 4e-40 Identities = 583/893 (65%), Gaps = 17/893 (2%) Strand=Plus/Minus Query 16663 AACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAG 16722 |||||| | |||| ||||| ||| | |||||| || || |||||||| || ||| Sbjct 111610 AACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAA 111551 Query 16723 AGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCA 16781 || || || ||||| |||||||| ||||| ||| | | | | ||||| | |||| | Sbjct 111550 TGAAATGTTTTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTTTATTACCTAA 111491 Query 16782 GTTCGGCGATTAATCTATCCGCTACA-AATTCTATATATTGGCACATTAATTC-GCAGTT 16839 | | | ||| | ||| || ||| || || | |||||| |||||||||| ||| || Sbjct 111490 AG-CAACTAATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCA-TT 111434 Query 16840 CATTCCTAT--AAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACC 16897 ||| |||| |||| | | || | ||| || || ||| || || || ||| Sbjct 111433 CATACCTAATAAAGAAG--CTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACA 111376 Query 16898 GCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAAC 16957 ||||| ||||||| | |||| ||| || || ||| ||| ||| | ||| ||| Sbjct 111375 GCTTCAGTAATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAAT 111316 Query 16958 ATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAAT 17017 | | ||| || ||||| |||||| || || || | | || | ||| || ||||| Sbjct 111315 AATAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAA 111256 Query 17018 GTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAA 17077 || || || ||||| |||| ||| || |||||||| || | || || || |||||| Sbjct 111255 GTTAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAA 111196 Query 17078 AAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTG 17137 ||||| ||||| || || | ||||| || | ||||| ||| || | || |||| Sbjct 111195 AAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCA 111136 Query 17138 TTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATG 17197 | | ||||||| | |||| || ||||||| || || || || ||||| || Sbjct 111135 TCAGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATA 111076 Query 17198 GCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTG 17257 || || ||||| | || || | | | || | ||||| ||||| || | || Sbjct 111075 GCATTGAATAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATGAA 111016 Query 17258 TACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCC 17317 || |||| || || || || ||||| || || || || ||||| ||| ||||| Sbjct 111015 TAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCT 110956 Query 17318 GCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTC 17377 | ||||||||||| | |||| ||| ||| |||||| || || || || || Sbjct 110955 GGAATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTGAA 110896 Query 17378 GCGGCGAAAAACGCCAA---TATATGCTTAATGAAATATTTTTCGTCCGGTGTAA--GAA 17432 || || || || || || | | ||| |||| || | || | ||| Sbjct 110895 GCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATC--ATTTAATCTTT 110838 Query 17433 CGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492 | ||| || | | |||||| |||| ||| | |||||| | |||||||| ||| Sbjct 110837 CATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTT 110778 Query 17493 CTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 | || |||||||| | ||| || |||| |||| || ||||||| |||| Sbjct 110777 CAGCTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAATAAAACA 110725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543245167520