Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq185 226 3e-54 >seq185 Length=130276 Score = 226 bits (250), Expect = 3e-54 Identities = 591/890 (66%), Gaps = 21/890 (2%) Strand=Plus/Minus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | |||| ||||| ||| | |||||| ||||| |||||||| || |||| Sbjct 111610 AACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAA 111551 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019 || || ||||||||||||||||| ||||| ||| | | | | || || | |||| | Sbjct 111550 TGAAATGTTTTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTTTATTACCTAA 111491 Query 16020 GTTCCGTAACTAAT---CTATCTGCTACA-AATTCTATATATTGACACATTAAGTCGCAA 16075 | ||||||| | ||| || ||| || || | ||||||||||||||| | | Sbjct 111490 A----GCAACTAATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCA 111436 Query 16076 TTAATTCCTAT--AAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAA 16133 || || |||| ||| | | || | ||| | || ||| ||| ||| || || Sbjct 111435 TTCATACCTAATAAAGAAG--CTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAA 111378 Query 16134 CCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAA 16193 | ||||| |||| || | | | |||||| ||| ||| |||| || || Sbjct 111377 CAGCTTCAGTAATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAA 111318 Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 | | || ||| || || || ||||| ||||| || | | || | ||| || |||| Sbjct 111317 ATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAA 111258 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCG 16313 ||||||| || |||||| |||| ||| || ||||| || || | ||||||||| || | Sbjct 111257 AAGTTAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAG 111198 Query 16314 AAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTT 16373 ||||||| ||||| ||||||| |||||||| | ||||| ||| || | ||| |||| Sbjct 111197 AAAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTT 111138 Query 16374 TATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTA 16433 || | ||||||| | |||| || ||||||| ||| ||||| || ||||| | Sbjct 111137 CATCAGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAA 111078 Query 16434 TGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAAC 16493 | || || || || | || || | ||| | ||||| |||||||| | ||| Sbjct 111077 TAGCATTGAATAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATG 111018 Query 16494 TGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553 || ||||||| || || || || || || || || ||||| || ||| ||| | Sbjct 111017 AATAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTT 110958 Query 16554 CCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCAC 16613 | | ||||| ||||| | | || ||| | | || ||||| || ||||| || Sbjct 110957 CTGGAATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTG 110898 Query 16614 TTGCAGCAAAAAACGCCAATATGTGCTT--AATGAAATATTTTTCGTCA-GATGTAAGAA 16670 |||||||| || || || | ||| ||| || | ||| | | || ||| Sbjct 110897 AAGCAGCAAAGAAAGCTAAAA--CTCTTGAAATAAAGAAACGTTCATTATCATTTAATCT 110840 Query 16671 T--ATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | || |||||| | | |||||| |||| ||| | |||||| | |||||||| ||| Sbjct 110839 TTCATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGC 110780 Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778 | || |||||||| || ||| || |||| |||| || || |||| Sbjct 110779 TTCAGCTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAATA 110730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412073064480