Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq291 185 6e-42 >seq291 Length=72889 Score = 185 bits (204), Expect = 6e-42 Identities = 448/676 (66%), Gaps = 22/676 (3%) Strand=Plus/Minus Query 101676 TTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACT 101735 |||||| |||||||| |||||| ||| | |||| ||| || |||||||| ||||| | Sbjct 11089 TTTTAA-AGCATCAACATGATCTTTATAAACATGAGAATCACCCATAGTATGTATAAATT 11031 Query 101736 CTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAA 101795 | ||| | | || | || | |||||||| |||||| | || ||| ||||| Sbjct 11030 CACCACAATCCATATCAACAACTTTTGCAATCATTTTAGTTAATAAAGCATAAGAAGCAA 10971 Query 101796 TGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAA--- 101852 | ||||| || ||||| | |||||||| ||||||||||| | | ||| || | Sbjct 10970 TATTAAAAGGAACTCCAAGACCCATATCGCAAGATCTTTGATATAATAAACATGATAATT 10911 Query 101853 ---GCTTTCCATCAC-AG--------ACATAAAATTGACTTAATACATGACAAGGCGGCA 101900 | || || || || ||||||||||| || |||||||| || || | Sbjct 10910 GTGGTTTACCTTCTTTAGGAAAATTAACATAAAATTGTGAAAAAACATGACATGGTGGTA 10851 Query 101901 ACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAG 101960 | |||| | || | |||| |||||| ||| |||||| || | | ||| || Sbjct 10850 ATGCCATAATTGGGAAATCTGGTGGATTCCATGCAGACATTATAATACGACGATCATAAG 10791 Query 101961 GGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAAT 102020 | |||||||| | ||| ||| | | |||||| ||||| |||| ||| ||||| Sbjct 10790 GATTTGTTTTCAATTTATGAATAACTTCAGCTAATTGATCAACACCTTGACCTGAATAAT 10731 Query 102021 CGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTC 102080 | || | | |||||| || |||||||| ||||| || |||||||| || || | Sbjct 10730 CAGCATCACAATCAGTATATTTAGCACCGAAATGTCTCCATTGGAATCCATAAACTGGAC 10671 Query 102081 CAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCAT 102140 | | ||| |||||| ||| ||| ||||| | ||||||||||||| | | ||||| Sbjct 10670 CTAAATCACCTTCACGTCTATCAGTTAAACCTAATTTATCTAAAAATTCACGACTTCCAT 10611 Query 102141 TCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGA 102200 | | |||||||| | || || | | || | ||| | || ||| | ||| | Sbjct 10610 TACCTTCCCAAATTTTAACACCTTTTTCACTTAATTTTTTACCATCTGTACAACCTTGAA 10551 Query 102201 TAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTG 102260 ||||||| | | |||| | | ||| | || ||| | || |||||||| | || Sbjct 10550 TAAACCAAAGTAATTCTAATATGATACCCTTTGTGAAGACTTTTTTGGTAGTTAATAATG 10491 Query 102261 GAAAT---TCATTTTCTAAACTAAACCTAGACTGTGTT---CCAAAAATACTCAGTGTTC 102314 | ||| |||| || |||| |||| || | |||| | ||||| ||||| ||| | Sbjct 10490 GGAATGTATCATCTTTTAAATTAAATCTTAATTGTGGTGGACCAAATATACTATATGTCC 10431 Query 102315 CAGTCCCTGTTCTGTC 102330 |||| |||||||| || Sbjct 10430 CAGTACCTGTTCTATC 10415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249597399364