Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq291 219 6e-52 seq292 196 7e-45 seq326 185 1e-41 seq275 176 7e-39 >seq291 Length=72889 Score = 219 bits (242), Expect = 6e-52 Identities = 496/731 (68%), Gaps = 30/731 (4%) Strand=Plus/Minus Query 205317 TCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATT-GtttttttAATC 205375 |||||| || |||||||||| ||| | ||| | || ||||| ||| |||||| Sbjct 11140 TCTTTTAATAATTAATTTTGGGAATTCATAAGGTTCTC-TTGTAATTTGTTCTTTTAAAG 11082 Query 205376 CATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTT 205435 ||| || ||||| ||| | ||| | || ||| ||| |||| ||||||||| | Sbjct 11081 CATCAACATGATCTTTATAAACATGAGAATCACCCATAGTATGTATAAATTCACCACAAT 11022 Query 205436 TTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATG 205495 | || | | | ||||||||| | ||| |||||| |||| ||||| |||||| | Sbjct 11021 CCATATCAACAACTTTTGCAATCATTTTAGTTAATAAAGCATAAGAAGCAATATTAAAAG 10962 Query 205496 GTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATG-TAA--GATATTTA- 205551 | || || | ||||||||| ||||||||||| | | ||||| ||| | |||| Sbjct 10961 GAACTCCAAGACCCATATCGCAAGATCTTTGATATAATAAACATGATAATTGTGGTTTAC 10902 Query 205552 -TTATT------AATTA-CATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATAT 205603 || || ||||| ||| ||||||| |||| |||||| ||||||| ||||| Sbjct 10901 CTTCTTTAGGAAAATTAACATAAAATTGTGAAAAAACATGACATGGTGGTAATGCCATAA 10842 Query 205604 TTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTA-GAT--TCAGGtttat 205660 || | |||| |||||||| || | | |||||| | | | ||| | ||| || Sbjct 10841 TTGGGAAATCTGGTGGATTCCATGCAG---ACATTATAATACGACGATCATAAGGATTTG 10785 Query 205661 tttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTAT 205720 |||| | ||||| |||| | | ||||||||||| |||||| || ||||| | || Sbjct 10784 TTTTCAATTTATGAATAACTTCAGCTAATTGATCAACACCTTGACCTGAATAATCAGCAT 10725 Query 205721 CCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAAT 205780 | |||| ||||||||||||| ||||| | |||||| || ||||||||||||||||||| Sbjct 10724 CACAATCAGTATATTTAGCACCGAAATGTCTCCATTGGAATCCATAAACTGGACCTAAAT 10665 Query 205781 CACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatga--tccattttc 205838 ||||||| ||||||| | ||||| ||| | || | | || | || |||||| | Sbjct 10664 CACCTTCACGTCTATCAGTTAAACCTAATTTATCTAAAAA--TTCACGACTTCCATTACC 10607 Query 205839 atcccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAA 205898 |||||||| | | ||||| | ||| | || || || | || ||||| Sbjct 10606 TTCCCAAATTTTAACACCTTTTTCACTTAATTTTTTACCATCTGTACAACCTTGAATAAA 10547 Query 205899 CCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA 205958 ||| | ||||||| | || || | || | | ||| || || |||||||| || Sbjct 10546 CCAAAGTAATTCTAATATGATACCCTTTGTGAAGACTTTTTTGGTAGTTAATAATGGGAA 10487 Query 205959 TGAATCATC---TAATTTATAT-TTCATAGT--TAAACCATATACAGTTTTTGTATCTAC 206012 || |||||| ||| ||| || || || || | |||| ||| | | | ||| | Sbjct 10486 TGTATCATCTTTTAAATTAAATCTTAATTGTGGTGGACCAAATATACTATATGTCCCAGT 10427 Query 206013 ACCTGTTCTAT 206023 ||||||||||| Sbjct 10426 ACCTGTTCTAT 10416 >seq292 Length=16354 Score = 196 bits (216), Expect = 7e-45 Identities = 185/236 (78%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || ||||||| ||||| || || |||| ||||| | | Sbjct 6620 ATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCTTCT 6561 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||||||||||||||||||||| |||||||||||| Sbjct 6560 GATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCAA 6501 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || ||||| || ||||||||||| ||| || |||| ||| |||||||| Sbjct 6500 CAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTATAAC 6441 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 ||||||||||||||||| || ||||| || ||| | ||| |||||||| |||||| Sbjct 6440 ATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGGTGGTAAAAA 6385 >seq326 Length=266662 Score = 185 bits (204), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || || |||||||| ||| |||| ||||| | Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| ||||| || ||||| ||||||||||||||||| |||||||| || Sbjct 239498 GATACTATTGACAATGTTAAATCA-AAAATCCAAGATAAAGAAGGTATTCCACCTGACCA 239440 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | ||||| || || ||||||||||| ||| || |||| ||| ||||| || Sbjct 239439 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAA 239380 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||||||||||||| ||||||||||| | | ||| |||||||| Sbjct 239379 TATTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGGT 239331 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || ||||||| |||||||| ||| |||| ||||| | Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||||| ||||||||||||||||| ||||| |||||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || || ||||||||||| || || |||| ||| ||| || || Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAAC 239607 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||||||| || |||||||||||| | || |||||||||| Sbjct 239606 ATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGGTAT 239557 Score = 168 bits (186), Expect = 1e-36 Identities = 180/238 (76%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | || || || || || ||| |||| ||||| || Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || ||| | ||| ||||||||||| ||||||||||| |||||||||||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | ||||| || || ||||||||||| ||| |||| || ||| ||| || || Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 239835 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||||||||||| || |||||||| ||| | ||| |||||||||| ||| || Sbjct 239834 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGGTATGCAAATTT 239777 Score = 167 bits (184), Expect = 4e-36 Identities = 182/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | || || |||||||| ||| |||| ||||| | Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct 240182 GACACTATTGACAATGTTAAATCA-AAAATTCAAGACAAGGAAGGTATTCCACCTGATCA 240124 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | |||||||| || ||||||||||| || || |||| ||| ||||| || Sbjct 240123 ACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAA 240064 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||| |||||||||||||| || |||||||| || | || |||||||||| ||| || Sbjct 240063 TATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGGTATGCAAATTT 240005 Score = 158 bits (174), Expect = 2e-33 Identities = 172/225 (76%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 124585 AGATTGAAGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTA 124644 || ||||| | ||| || ||| ||| | ||| || ||||||||||||||||| | Sbjct 240424 AGGTTGAATCTTCTGACACTATTGATAACGTCAAATCCAAGATTCAAGATAAAGAAGGGA 240365 Query 124645 TACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACAT 124704 | ||||| ||||||||| | | |||||||| || ||||||||||| ||| |||| || | Sbjct 240364 TCCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTT 240305 Query 124705 TAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTG 124764 || ||| || || ||||||||||||||||| || |||||||| ||| | ||| |||||| Sbjct 240304 TATCAGACTACAACATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTG 240245 Query 124765 GTAT-TAAAAATTCATAAAAA--TTGATTGTAAATAAATATCACT 124806 |||| ||| ||| | |||| |||| || || || ||||||| Sbjct 240244 GTATGCAAATTTTCGTCAAAACTTTGACTGGTAA-AACTATCACT 240201 >seq275 Length=119121 Score = 176 bits (194), Expect = 7e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 124561 TAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAATTTAAAAC 124620 |||| || || || || || |||| ||||| | |||||| ||| ||| | ||| Sbjct 71343 TAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATTGACAATGTCAAAT 71284 Query 124621 AGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAA 124680 ||||||||||| ||||||||||| ||||||||||||||| | | || ||||| || | Sbjct 71283 CAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTAATCTTTGCTGGTA 71224 Query 124681 AACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGC 124740 |||||||||| ||| || |||| ||| ||||| || |||||||||||||||||||| | Sbjct 71223 AACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAAGAATCAACTTTAC 71164 Query 124741 ATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 |||||||||| | ||| |||||||||||| Sbjct 71163 ATTTGGTTTTGAGATTAAGAGGTGGTATTA 71134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452562675200