Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq300 107 4e-18 seq331 91.5 3e-13 seq102 91.5 3e-13 >seq300 Length=94169 Score = 107 bits (118), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 135600 AGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACT 135659 ||| ||||| || ||| ||| |||||||| | | | ||||||||||| ||||| ||| | Sbjct 84346 AGACAAAGATGAATGGGGTACATGGAAAAATAGAACAGATCCTGTTTTACATATTGAATT 84287 Query 135660 TAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAAT 135719 | | ||||| ||| |||| ||| | || || ||||| |||||||| ||| ||||||| Sbjct 84286 ACGTCGTTGGGCTGATATTTTAATTGTTGCACCATTAACTGCAAATACTTTATCAAAAAT 84227 Query 135720 AGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATAC 135773 | | ||| | || ||||||||| | || | || | ||||| ||| |||| Sbjct 84226 TGGTTTAGGTCTTTGTGATAATTTATTAACAAATGTTATTAGAGCTTGGAATAC 84173 >seq331 Length=106725 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 75256 TCTTGACCAAGGGAAAATAGAATATTCACGGTATAAGAAACATACAGAATAACCATTTTC 75315 |||||| |||| || | ||| ||||||| | ||| ||| |||| |||||||||||| Sbjct 12067 TCTTGAATAAGGTAATAAAGAGAATTCACGATGTAAAAAAATCACAGCATAACCATTTTC 12126 Query 75316 TATTAACTTTTCAACAGAAATAGCTCCTCTCATACCCGTACTAAAATTCTCTAAAAATCT 75375 | || | |||| || |||| ||||| |||| | ||||||||| || | |||||| Sbjct 12127 AAGAAAATATTCAGCACTTGTAGCACCTCTTGTACCAGCACTAAAATTATCAATAAATCT 12186 Query 75376 GACTGGttttttttCTAAAGATACTCTAGTCCCTCCAGATGTGAC 75420 || | || ||||| || | || |||| || ||||| ||||| Sbjct 12187 AACAGTATTATTTTCCAATGGGACAGTAGTACCACCAGAAGTGAC 12231 >seq102 Length=19803 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 135625 aaaaaaaTACCCGATCCTGTTTTGCATATAGAACTTAGGAGATGGGCGGATGT--TTTTA 135682 |||||||| ||||| ||||| |||| |||| | || |||||||| ||| | | ||| Sbjct 7758 AAAAAAATGGGAGATCCAGTTTTACATACAGAATTAAGAAGATGGGCTGATATAATGTTA 7699 Query 135683 TTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAATGGTATATGCGATAATT 135742 | ||| || |||| |||||||| ||||||||||| | |||||||| || ||||||| Sbjct 7698 AT-TAGT-CCTTTAAGTGCAAATACTTTAGCAAAAATTTCGAATGGTATTTGTGATAATT 7641 Query 135743 TACTGACGTCTATTGTAAGAGCCTGG 135768 || |||| |||| | ||| |||| Sbjct 7640 TATTGACTGCTATCATTAGAAGCTGG 7615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923192599454560