Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq292 152 8e-32
seq326 147 3e-30
seq275 127 3e-24
>seq292
Length=16354
Score = 152 bits (168), Expect = 8e-32
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | |||||| || |||||||| || |||||||| || |||||||| ||
Sbjct 6394 CCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGAT 6453
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| ||||||||||| |||||||| || || | ||| ||||| || |||
Sbjct 6454 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 6513
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||||||||| |||||| ||| ||| |||
Sbjct 6514 ATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACT 6573
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|||| || || |||||||||||||| ||||||| || |||||||| ||
Sbjct 6574 TCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTT 6623
>seq326
Length=266662
Score = 147 bits (162), Expect = 3e-30
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | |||||| ||||||||||| || |||||||| || || || |||||
Sbjct 239560 CCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239619
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || ||||||||||| ||||| ||||| || | ||| ||||| || |||
Sbjct 239620 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGA 239679
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||||||||| |||||| ||| ||| |||
Sbjct 239680 ATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACT 239739
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| || || |||||||||||||| ||||||| ||| ||||||||
Sbjct 239740 TCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786
Score = 138 bits (152), Expect = 2e-27
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||||||||| || |||||||| ||||| ||||| ||
Sbjct 240016 CCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGAT 240075
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || ||||||||||| |||||||||||||| | ||| ||||| || |||
Sbjct 240076 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 240135
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||| |||||| ||| |||
Sbjct 240136 ATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACT 240195
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| |||||||| || || ||||| | ||| ||||||||
Sbjct 240196 TCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242
Score = 129 bits (142), Expect = 9e-25
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| | |||||||| || || |||||||| ||||| ||||| ||
Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGAT 239391
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| ||||||||||| ||||| ||||| || | ||| || || || |||
Sbjct 239392 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGA 239451
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||||||||| |||||||||| ||| |||
Sbjct 239452 ATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACT 239511
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| |||||||| || || || |||| || ||||||||
Sbjct 239512 TCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558
Score = 125 bits (138), Expect = 1e-23
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | |||||| ||||||||||| || |||||||| || || || |||||
Sbjct 239788 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239847
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| ||||||||||| ||||| |||||||| | ||| ||||| || |||
Sbjct 239848 AAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGA 239907
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| || ||||| ||| |||
Sbjct 239908 ATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACT 239967
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| || || || ||||| || || ||||||| ||| ||||||||
Sbjct 239968 TCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014
Score = 125 bits (138), Expect = 1e-23
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | |||||| ||||||||||| || |||||||| || || || |||||
Sbjct 240244 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 240303
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| ||||||||||| |||||||||||||| | ||| ||||| || ||
Sbjct 240304 AAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGGG 240363
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||||||||||||
Sbjct 240364 ATCCCTTCTTTATCTTG 240380
>seq275
Length=119121
Score = 127 bits (140), Expect = 3e-24
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || |||||||||||||| |||||||| || || ||||| ||
Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| ||||||||||| |||||||| || || | ||| ||||| || |||
Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| ||||| ||||| ||| ||| |||
Sbjct 71259 ATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACT 71318
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAA 146268
|||| || || || ||||| ||||| ||||||| |||
Sbjct 71319 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743523016954880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |