Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq185 389 4e-103 >seq185 Length=130276 Score = 389 bits (430), Expect = 4e-103 Identities = 598/844 (71%), Gaps = 17/844 (2%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 ||||||||| || |||||| |||||||||||||| ||||| || |||||||||| || Sbjct 111601 TTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAATGAAATGTT 111542 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGCATCCCAATTCCAAC 16060 ||||||||||||||| |||||| | |||| |||| |||| | || || | | Sbjct 111541 TTCCATAAAATCAAATGGATTTGT--AACATTATAGAATTTTTTATTACCTAAAGCAACT 111484 Query 16061 AATAATCTATCCGCCACA-AATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTAT 16119 ||||| | ||| || ||| || || | ||| || |||||| | | ||||| |||| Sbjct 111483 AATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCATTCATACCTAA 111425 Query 16120 TAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGAT 16179 ||| | | || | || || || ||| | | ||| || ||| |||||| | || Sbjct 111424 TAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGCTTCAGTAAT 111365 Query 16180 TATATCTCTTACTACACTATTTAACGGAGGGTTTAAT----AAGTGTTTAAACATTATAC 16235 || | || | ||| | | | | || |||||| | || || ||| | || || Sbjct 111364 AATTT---TTTCAACAATTTCTT-CAGATGGTTTATTTTTTAAATGAGCAAATAATAAAC 111309 Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295 ||||||||||| ||| || ||||| || | || ||||| || |||||||| || | || Sbjct 111308 AAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGTTAAAC 111249 Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355 | ||||||| |||| |||||| | |||||| || | |||||||||||||||||||| | Sbjct 111248 CAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAAGAAAA 111189 Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415 |||||||||| || ||||| ||||| |||| |||||| | | || | | | Sbjct 111188 TACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCATCAGCAA 111129 Query 16416 tccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAA 16475 ||||| || |||||||| ||||||| ||||| ||| ||| | || || ||||| | Sbjct 111128 TCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGCATTGA 111069 Query 16476 ATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTT 16535 ||||||| | || ||| |||| |||||||||||| |||| ||| ||| ||| Sbjct 111068 ATAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATGAATAAGTTT 111009 Query 16536 CTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTT 16595 ||||||||||||| ||||| || || ||||||||||| ||| ||||||| | |||| Sbjct 111008 CTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCTGGAATTT 110949 Query 16596 GTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAA 16655 | ||||||| | || |||| |||| ||||| ||||| || ||||| ||| |||| Sbjct 110948 GAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTGAAGCAGCAA 110889 Query 16656 AAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACCAGT 16712 | || || | | | |||||| ||| ||||| | || ||| | ||| | Sbjct 110888 AGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTCATTCCAAT 110829 Query 16713 CAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTT 16772 || || ||||||||||||||| | ||||| |||||||||| ||||| |||| |||| Sbjct 110828 CATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTCAGCTTTTT 110769 Query 16773 TATA 16776 |||| Sbjct 110768 TATA 110765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509895570400