Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq291 161 1e-34 seq221 102 1e-16 >seq291 Length=72889 Score = 161 bits (178), Expect = 1e-34 Identities = 406/602 (67%), Gaps = 35/602 (6%) Strand=Plus/Plus Query 104153 AAGGCGAAGATCGTGACGATAGAACAGGAATTGGAACTAAAAATGTATTTGG---AGAAC 104209 |||| ||| ||||| ||||||||||| | ||| || | | | ||||||| | || Sbjct 10398 AAGGTGAACATCGTCCAGATAGAACAGGTACTGGGACATATAGTATATTTGGTCCACCAC 10457 Query 104210 AATTAAAATTTAATTTAA--GAACAT-CTTTTCCGTTACTAACTACaaaaaaaGTTTTTT 104266 |||||| ||||||||||| || || | || || ||| ||||||| |||||||| || Sbjct 10458 AATTAAGATTTAATTTAAAAGATGATACATTCCCATTATTAACTACCAAAAAAGTCTTCA 10517 Query 104267 GGAAAGGAGTTGTAGAAGAACTCTTATGGTTTATTAGCGGGAGTACAGATGTTTCTGTAT 104326 || || | || |||| | | ||||||||| || ||||||||| | || Sbjct 10518 CAAAGGGTATCATATTAGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAAAAAAT 10577 Query 104327 TAAATCAAAAAGGAGTTAAAATTTGGAATAAAAATGCAGAATCGT---TTTATACACAAC 104383 ||| | ||||||| |||||||||||| | |||| | | |||| ||| || | || Sbjct 10578 TAAGTGAAAAAGGTGTTAAAATTTGGGAAGGTAATGGA-AGTCGTGAATTTTTAGATAA- 10635 Query 104384 AAAATCTTTT-----Taaaa---aaaaTGATTTAGGACCTATTTATGGTTTTCAGTGGAG 104435 | | ||| || | || ||||||||| || ||||||| || || ||||| Sbjct 10636 ATTAGGTTTAACTGATAGACGTGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAG 10695 Query 104436 ACATTATGGTGAAAATTATATTGGGTGCGATAATAAATAT---GGT---GGTATAGATCA 104489 ||||| |||| || |||| || || ||| | | ||| ||| ||| | ||||| Sbjct 10696 ACATTTCGGTGCTAAATATACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGATCA 10755 Query 104490 ACTCAAAAATATTATTACAACAATTCAAAATGAA-CCTTGGGATAGAAGAATGATATTAT 104548 | | | ||||| || |||| |||| || |||| ||| | | || ||| | | Sbjct 10756 ATTAGCTGAAGTTATT-CATAAATTGAAAACAAATCCTTATGATCGTCGTATTATAATGT 10814 Query 104549 TAGCTTGGAACCCAAAGGATAATTCTAAA--ATGGCACTTCCTCCTTGTCATTGTATAGC 104606 || ||||| ||| ||| ||| || |||||| | || || |||||| | | | Sbjct 10815 CTGCATGGAATCCACCAGAT--TTCCCAATTATGGCATTACCACCATGTCATGTTTTTTC 10872 Query 104607 ACATTTTGATGTAAGTT--CAAAAATAAATGGTAAAAGAGAATTGTCTTGTCATTTATTT 104664 ||| ||| |||| | || | ||| || |||||| | |||| || ||| |||| | Sbjct 10873 ACAATTTTATGTTAATTTTCCTAAAGAA--GGTAAACCACAATTATCATGTTTATTATAT 10930 Query 104665 CAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCAAGTTATGCATTATTA 104724 ||||||||| |||||||| | |||||||||||||| || || |||||| |||||| Sbjct 10931 CAAAGATCTTGCGATATGGGTCTTGGAGTTCCTTTTAATATTGCTTCTTATGCTTTATTA 10990 Query 104725 AC 104726 || Sbjct 10991 AC 10992 >seq221 Length=23070 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 73950 AATAGACAACCTACTTTACATAAAGCATCAATGATGGCTCTTCGAGTTAAAATTATGGAT 74009 ||| | |||||| | ||||||||| || |||||||| | ||| |||||| ||||| | Sbjct 6274 AATCGTCAACCTTCATTACATAAAATGTCCATGATGGCACATCGTGTTAAAGTTATGCCT 6215 Query 74010 GTAAAAACCTTTAAATTTAATCTTGCATGCACTAAACCATATAATGCAGATTTTGATGGA 74069 ||| |||| ||| ||| | || ||| ||| |||||||| ||||| ||||| Sbjct 6214 TACTCAACTTTTAGATTAAATTTATCAGTTACTTCACCTTATAATGCGGATTTCGATGGT 6155 Query 74070 GATGAAATGAATGCTCATGCGCCTCAATCAGAAGAAAGTAAAGCTGAGTTA 74120 |||||||||||| || | || ||||| ||||||| | |||||| ||| Sbjct 6154 GATGAAATGAATTTACACGTTCCACAATCTGAAGAAACAAGAGCTGAATTA 6104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679811306844480