Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq292 114 1e-20 seq326 93.3 3e-14 >seq292 Length=16354 Score = 114 bits (126), Expect = 1e-20 Identities = 176/249 (71%), Gaps = 3/249 (1%) Strand=Plus/Plus Query 18085 TTTCTTTTTGTTATC--CTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTG 18142 ||||||||| ||| | | || | || ||| | || | || | ||||||||||||||| Sbjct 6379 TTTCTTTTT-TTACCACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTG 6437 Query 18143 AATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCT 18202 |||||| || || | | ||| ||| |||||| |||||||| || ||| |||| | | Sbjct 6438 AATGTTATAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACG 6497 Query 18203 TTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGT 18262 ||||||||| || | ||||| ||||| ||||| | ||||| | ||| ||| Sbjct 6498 TTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGT 6557 Query 18263 GTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTG 18322 ||| | || ||| | ||| ||| |||| || || || ||||| ||||||||||| Sbjct 6558 ATCAGAAGATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTG 6617 Query 18323 CATTTTTAA 18331 ||| || || Sbjct 6618 CATCTTGAA 6626 >seq326 Length=266662 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||||||||||||||| || ||||| || | | ||| ||| ||||| Sbjct 240034 ACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGATAAGGTTCTACCGTCTTCT 240093 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || ||| | || | | ||||||||| || | |||||||| || | Sbjct 240094 AATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 240153 Query 18237 ATTTGTTGCTTGACCTGTG-CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| ||| || | | || ||| |||||| | || ||| | ||||| |||| Sbjct 240154 ATTT-TTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGATAGTTTT 240212 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || ||||| ||||| || ||||||||||| Sbjct 240213 ACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || | || |||||| |||| || | |||||||||||||||||| ||||| || | Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGAT 239391 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| ||| |||||| |||||||| || || | || | | |||||| || || Sbjct 239392 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGA 239451 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG-CAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| |||| ||| || | | || ||| ||| || | || Sbjct 239452 ATACCTTCTTTATCTTGGATTT-TTGATTTAACATTGTCAATAGTATCTGAAGATTCAAC 239510 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||| |||| || ||||| || || ||||| |||||||| Sbjct 239511 TTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| || | ||||||||||||||||||||||||||| | | ||| ||| ||||| Sbjct 239578 ACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCTTCT 239637 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 |||||||| || || | || | | ||||||||| || | ||||| ||||| Sbjct 239638 AATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGG 239697 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| | ||||| | ||| ||| || | || ||| | || || |||| Sbjct 239698 ATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTTTTA 239757 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || ||||| || ||||||||||| Sbjct 239758 CCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379342317135180