Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq326 100 3e-16
seq275 100 3e-16
seq292 98.7 1e-15
seq277 82.4 8e-11
>seq326
Length=266662
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | ||| || || || | || || |||||||| || || |||||
Sbjct 240016 CCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGAT 240075
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || |||||| | |||||||||||| | |||| |||||| ||||| || ||
Sbjct 240076 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 240135
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| |||||| |||| | | || | ||||| | | || ||
Sbjct 240136 ATACCTTCCTTGTC-TTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAAC 240194
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || || ||||| ||||| ||||| |||||||||
Sbjct 240195 TTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCATA 240243
Score = 98.7 bits (108), Expect = 1e-15
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| ||| | || || || || | || || |||||||||||||| || || |
Sbjct 239788 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTC--TG 239845
Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655
|| | ||| ||||| | ||||||||||| | |||| |||||| ||||| || |
Sbjct 239846 ATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTG 239905
Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCC 139714
| || ||||||||||| ||| |||| | |||| | | || | ||||| | | ||
Sbjct 239906 GAATACCTTCTTTGTC-TTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCA 239964
Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||| || ||||| ||||| ||||| |||||||||
Sbjct 239965 ACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATA 240015
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612
||||| || || | || || |||||||||||||| || || | || || ||||
Sbjct 239575 AAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCT 239634
Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672
|| | ||||||||||| | || | |||||| ||||| || || || |||||||| ||
Sbjct 239635 TCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCT 239694
Query 139673 GTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732
||||||| ||| | | || | || |||| | || || || | || | ||
Sbjct 239695 TGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTT 239754
Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || || || ||||| ||||| |||||||||
Sbjct 239755 TTACCTGTTAAGGTTTTAACGAAAATTTGCATA 239787
>seq275
Length=119121
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| ||| | |||||| || || | || || |||||||||||||| |||||
Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | |||||||||||| |||| | |||||| ||||| || ||
Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| |||||| ||| | | || | || || | | || ||
Sbjct 71259 ATACCTTCTTTGTC-TTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAAC 71317
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755
|| | ||| | ||||| || || || ||||| |||||
Sbjct 71318 TTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356
>seq292
Length=16354
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| ||| | || ||||| || | || || ||||||||||||||||||||
Sbjct 6394 CCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGAT 6453
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | |||||||||||| |||| | |||||| ||||| || ||
Sbjct 6454 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 6513
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| |||||||| || ||| |||||| ||| | | || | || || | | || ||
Sbjct 6514 ATACCTTCTTTATC-TTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAAC 6572
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | || || || || || ||||| || || ||||||||
Sbjct 6573 TTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620
>seq277
Length=184736
Score = 82.4 bits (90), Expect = 8e-11
Identities = 126/177 (71%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 153632 GGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTC 153691
|||||| || || ||||| ||||| ||| ||| || || | | |||| || |||||
Sbjct 159842 GGCAATTGAAGCTAAGTTACAAACAGCAACTTCATCTGGTGATGAGTATTCAACAATTTC 159783
Query 153692 CGCACACAAATT-GCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGCGGTTAC 153750
| ||| || || | || |||| || | || | || ||||||| |||| |||||
Sbjct 159782 AGTACATAAGTTTGATG-ATTTGATGATACCCAAGTTCTTTTGATTAGTTTTCTTGTTAC 159724
Query 153751 AAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATAG 153807
|||| || ||||| ||||||||||| || || ||||| | |||| ||| | ||||
Sbjct 159723 AAGCATCTTTGTAAAGCATGTATGGAGTACCAGTTTCAGTTTGAGCTTCCAAGATAG 159667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496061742908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |