Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq326 100 3e-16 seq275 100 3e-16 seq292 98.7 1e-15 seq277 82.4 8e-11 >seq326 Length=266662 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | ||| || || || | || || |||||||| || || ||||| Sbjct 240016 CCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGAT 240075 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || |||||| | |||||||||||| | |||| |||||| ||||| || || Sbjct 240076 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 240135 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| |||||| |||| | | || | ||||| | | || || Sbjct 240136 ATACCTTCCTTGTC-TTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAAC 240194 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || || ||||| ||||| ||||| ||||||||| Sbjct 240195 TTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCATA 240243 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | || || || || | || || |||||||||||||| || || | Sbjct 239788 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTC--TG 239845 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || | ||| ||||| | ||||||||||| | |||| |||||| ||||| || | Sbjct 239846 ATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTG 239905 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCC 139714 | || ||||||||||| ||| |||| | |||| | | || | ||||| | | || Sbjct 239906 GAATACCTTCTTTGTC-TTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCA 239964 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || | || | ||||| || ||||| ||||| ||||| ||||||||| Sbjct 239965 ACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCATA 240015 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612 ||||| || || | || || |||||||||||||| || || | || || |||| Sbjct 239575 AAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCT 239634 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 || | ||||||||||| | || | |||||| ||||| || || || |||||||| || Sbjct 239635 TCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCT 239694 Query 139673 GTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 ||||||| ||| | | || | || |||| | || || || | || | || Sbjct 239695 TGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTT 239754 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || || || || ||||| ||||| ||||||||| Sbjct 239755 TTACCTGTTAAGGTTTTAACGAAAATTTGCATA 239787 >seq275 Length=119121 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | |||||| || || | || || |||||||||||||| ||||| Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| |||| | |||||| ||||| || || Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| |||||| ||| | | || | || || | | || || Sbjct 71259 ATACCTTCTTTGTC-TTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAAC 71317 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755 || | ||| | ||||| || || || ||||| ||||| Sbjct 71318 TTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 >seq292 Length=16354 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||| | || ||||| || | || || |||||||||||||||||||| Sbjct 6394 CCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGAT 6453 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||||||||| |||| | |||||| ||||| || || Sbjct 6454 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 6513 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||||| ||| | | || | || || | | || || Sbjct 6514 ATACCTTCTTTATC-TTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAAC 6572 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | || || || || || ||||| || || |||||||| Sbjct 6573 TTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq277 Length=184736 Score = 82.4 bits (90), Expect = 8e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 153632 GGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATATTGTACTATTTC 153691 |||||| || || ||||| ||||| ||| ||| || || | | |||| || ||||| Sbjct 159842 GGCAATTGAAGCTAAGTTACAAACAGCAACTTCATCTGGTGATGAGTATTCAACAATTTC 159783 Query 153692 CGCACACAAATT-GCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTTTTGCGGTTAC 153750 | ||| || || | || |||| || | || | || ||||||| |||| ||||| Sbjct 159782 AGTACATAAGTTTGATG-ATTTGATGATACCCAAGTTCTTTTGATTAGTTTTCTTGTTAC 159724 Query 153751 AAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTATAATAG 153807 |||| || ||||| ||||||||||| || || ||||| | |||| ||| | |||| Sbjct 159723 AAGCATCTTTGTAAAGCATGTATGGAGTACCAGTTTCAGTTTGAGCTTCCAAGATAG 159667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061742908800