Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq185 446 2e-120 >seq185 Length=130276 Score = 446 bits (494), Expect = 2e-120 Identities = 629/874 (72%), Gaps = 11/874 (1%) Strand=Plus/Minus Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628 ||||| || ||||||||| || |||||||||||||||||| ||||||||||| | Sbjct 111612 ATAACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCT 111553 Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACC 13687 | ||| || |||||||||||||||||||||||| | |||| | | | ||| | | ||| Sbjct 111552 AATGAAATGTTTTCCATAAAATCAAATGGATTTGTA-ACATTATAGAATTTTTTATTACC 111494 Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747 || | | || ||| | ||||||| ||||||| ||||||| ||||||| | | ||| Sbjct 111493 TAAAGCAACTAATAAACGATCAGCACAGAACTCAACATATTGACACATTAATTTAGCATT 111434 Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807 |||||||| || | || | || || ||| |||| ||| || || ||||| Sbjct 111433 CATACCTAATAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGC 111374 Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867 || | ||||| || || ||| || | ||| || || ||||| ||| ||| | Sbjct 111373 TTCAGTAATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAATAA 111314 Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927 |||||| ||||||||| ||| | || ||||| | || ||| | ||| |||||||| || Sbjct 111313 TAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGT 111254 Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987 ||| || ||||| || |||| |||||| |||||||| |||| ||||||||| || ||||| Sbjct 111253 TAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAA 111194 Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047 ||| || || ||||| |||||||| || | ||||| ||| || || | |||| || | Sbjct 111193 GAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCATC 111134 Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107 | |||||| || |||||| |||| ||||| ||||||| | || ||||||||||| Sbjct 111133 AGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGC 111074 Query 14108 ATTAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 ||| ||||||||||| ||| | ||| | ||| || | || |||||||| | ||| | Sbjct 111073 ATTGAATAAATATTCAGCTTGT-TTTGGATCTTTAA-TATAAGTATCAATTAATAATGAA 111016 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225 || |||| || || || |||||||| || || ||||||||||| ||| ||||||| Sbjct 111015 TAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCT 110956 Query 14226 GACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284 | ||| ||||| | || |||| |||| | |||||||||||||| |||||||| Sbjct 110955 GGAATTTGAACTTCAGCAGAGAAAT-TTTCAACTAAATTTTCATTAACAATACCATCTGA 110897 Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT-- 14342 ||| ||||| || || || | || ||||||| | | || | || || | | || Sbjct 110896 AGCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTC 110837 Query 14343 -TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14401 |||||||| | ||| || || | ||| | ||| ||| | |||||||| ||| | Sbjct 110836 ATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTC 110777 Query 14402 AGCTTTTTTATACATTACCCATATTTCTTTATAT 14435 |||||||||||| | ||| ||||| | |||| Sbjct 110776 AGCTTTTTTATATGCTTGCCAGATTTCATGATAT 110743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479725817237600