Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq185 446 2e-120
>seq185
Length=130276
Score = 446 bits (494), Expect = 2e-120
Identities = 629/874 (72%), Gaps = 11/874 (1%)
Strand=Plus/Minus
Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628
||||| || ||||||||| || |||||||||||||||||| ||||||||||| |
Sbjct 111612 ATAACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCT 111553
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACC 13687
| ||| || |||||||||||||||||||||||| | |||| | | | ||| | | |||
Sbjct 111552 AATGAAATGTTTTCCATAAAATCAAATGGATTTGTA-ACATTATAGAATTTTTTATTACC 111494
Query 13688 TAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13747
|| | | || ||| | ||||||| ||||||| ||||||| ||||||| | | |||
Sbjct 111493 TAAAGCAACTAATAAACGATCAGCACAGAACTCAACATATTGACACATTAATTTAGCATT 111434
Query 13748 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 13807
|||||||| || | || | || || ||| |||| ||| || || |||||
Sbjct 111433 CATACCTAATAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGC 111374
Query 13808 CTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
|| | ||||| || || ||| || | ||| || || ||||| ||| ||| |
Sbjct 111373 TTCAGTAATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAATAA 111314
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
|||||| ||||||||| ||| | || ||||| | || ||| | ||| |||||||| ||
Sbjct 111313 TAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGT 111254
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987
||| || ||||| || |||| |||||| |||||||| |||| ||||||||| || |||||
Sbjct 111253 TAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAA 111194
Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047
||| || || ||||| |||||||| || | ||||| ||| || || | |||| || |
Sbjct 111193 GAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCATC 111134
Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107
| |||||| || |||||| |||| ||||| ||||||| | || |||||||||||
Sbjct 111133 AGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGC 111074
Query 14108 ATTAAATAAATATTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165
||| ||||||||||| ||| | ||| | ||| || | || |||||||| | ||| |
Sbjct 111073 ATTGAATAAATATTCAGCTTGT-TTTGGATCTTTAA-TATAAGTATCAATTAATAATGAA 111016
Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225
|| |||| || || || |||||||| || || ||||||||||| ||| |||||||
Sbjct 111015 TAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCT 110956
Query 14226 GACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACT 14284
| ||| ||||| | || |||| |||| | |||||||||||||| ||||||||
Sbjct 110955 GGAATTTGAACTTCAGCAGAGAAAT-TTTCAACTAAATTTTCATTAACAATACCATCTGA 110897
Query 14285 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT-- 14342
||| ||||| || || || | || ||||||| | | || | || || | | ||
Sbjct 110896 AGCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTC 110837
Query 14343 -TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14401
|||||||| | ||| || || | ||| | ||| ||| | |||||||| ||| |
Sbjct 110836 ATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTC 110777
Query 14402 AGCTTTTTTATACATTACCCATATTTCTTTATAT 14435
|||||||||||| | ||| ||||| | ||||
Sbjct 110776 AGCTTTTTTATATGCTTGCCAGATTTCATGATAT 110743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479725817237600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |