Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq185 432 4e-116 >seq185 Length=130276 Score = 432 bits (478), Expect = 4e-116 Identities = 626/874 (72%), Gaps = 11/874 (1%) Strand=Plus/Minus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 ||||| || ||||||||| || ||||||||||||||| || ||||||||||| | Sbjct 111612 ATAACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCT 111553 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACC 13475 | ||| || |||||||||||||| ||||||||||| |||| | | | ||| | | ||| Sbjct 111552 AATGAAATGTTTTCCATAAAATCAAATGGATTTGTA-ACATTATAGAATTTTTTATTACC 111494 Query 13476 TAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATT 13535 || | | |||||| | ||||||| ||||||| ||||||| ||||||| | | ||| Sbjct 111493 TAAAGCAACTAATAAACGATCAGCACAGAACTCAACATATTGACACATTAATTTAGCATT 111434 Query 13536 CATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGC 13595 |||||||| || | || | || ||| ||| |||| ||| || || ||||| Sbjct 111433 CATACCTAATAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGC 111374 Query 13596 CTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13655 || | ||||| | | || ||| || | ||| || || ||||| ||| ||| | Sbjct 111373 TTCAGTAATAATTTTTTCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAATAA 111314 Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715 |||||| ||||||||| ||| | || ||||| | || ||| | ||| |||||||| || Sbjct 111313 TAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGT 111254 Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775 ||| || ||||| || |||| |||||| |||||||| |||| ||| ||||| || ||||| Sbjct 111253 TAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAA 111194 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835 ||| || || ||||| |||||||| || | || || ||| || || | |||| || | Sbjct 111193 GAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCATC 111134 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 | |||||| || |||||| |||| ||||| ||||||| | || ||||| || || Sbjct 111133 AGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGC 111074 Query 13896 ATTGAATAAATGTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 ||||||||||| ||| ||| | ||| | ||| || | || |||||||| | ||| | Sbjct 111073 ATTGAATAAATATTCAGCTTGT-TTTGGATCTTTAA-TATAAGTATCAATTAATAATGAA 111016 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 || |||| || || || ||||| || || || ||||||||||||||| |||||||| Sbjct 111015 TAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCT 110956 Query 14014 GACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACT 14072 | ||| || || | || |||| |||| | || |||||||||||||||||||| Sbjct 110955 GGAATTTGAACTTCAGCAGAGAAAT-TTTCAACTAAATTTTCATTAACAATACCATCTGA 110897 Query 14073 AGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTT-- 14130 ||| ||||| || || || | || ||||||| | | || | || || | | || Sbjct 110896 AGCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTC 110837 Query 14131 -TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 |||||||| | ||| || || | ||| | ||| ||| | |||||||| ||| | Sbjct 110836 ATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTC 110777 Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATAT 14223 |||||||||||| | ||| ||||| | |||| Sbjct 110776 AGCTTTTTTATATGCTTGCCAGATTTCATGATAT 110743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586622420960