Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq292 145 5e-30 seq326 127 1e-24 seq275 111 1e-19 >seq292 Length=16354 Score = 145 bits (160), Expect = 5e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| |||||||| || ||||||| || ||||||||||| |||||||| Sbjct 6393 ACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGA 6452 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | |||| || |||||||| || ||||| || || ||||| || || | || Sbjct 6453 TAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGG 6512 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| ||||||| |||||| | ||| |||||| | | || || Sbjct 6513 AATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAAC 6572 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| |||||||| |||||||| || ||||| |||||||| Sbjct 6573 TTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq326 Length=266662 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| ||||| | |||||||| | || |||||||||||||| ||||| Sbjct 239331 ACCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGA 239390 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | |||| || |||||||| || || || || || ||||| ||||| | || Sbjct 239391 TAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGG 239450 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| |||||| ||| || | ||| |||||||| | || || Sbjct 239451 AATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAAC 239510 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || |||||||| ||||| |||||||| Sbjct 239511 TTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||||||| |||||||||| || ||||||||||| || || || Sbjct 239559 ACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGA 239618 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || || |||||||| || || || || || ||||| || || | || Sbjct 239619 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGG 239678 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| |||||| |||||| || ||| |||||| | | || || Sbjct 239679 AATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAAC 239738 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| |||||||| ||||| || || || || |||||||| Sbjct 239739 TTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| |||||||| |||||||||| || ||||||||||| || || || Sbjct 239787 ACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGA 239846 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| ||| |||| || |||||||| || || || ||||| ||||| || || | || Sbjct 239847 TAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGG 239906 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| |||||| ||| || || | | || |||| | || || Sbjct 239907 AATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAAC 239966 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| || ||||| || || || |||||||| Sbjct 239967 TTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||||||||| || |||||||||| || |||||||| ||||| ||||| Sbjct 240015 ACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGA 240074 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || || |||||||| || ||||| ||||| ||||| || || | || Sbjct 240075 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGG 240134 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| ||||||| ||| || | ||| ||| |||| | || || Sbjct 240135 AATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAAC 240194 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || ||||| || || || |||||||| Sbjct 240195 TTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 100 bits (110), Expect = 2e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| |||||||| |||||||||| || ||||||||||| || || || Sbjct 240243 ACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGA 240302 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| ||| |||| || |||||||| || ||||| ||||| ||||| || || | || Sbjct 240303 TAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGTGG 240362 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATC 44061 | |||||||||||| ||| || |||||| || ||| ||| || Sbjct 240363 GATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTC 240410 >seq275 Length=119121 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| ||||| ||||| || |||||||||| || ||||||||||| || ||||| Sbjct 71138 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGA 71197 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | |||| || |||||||| || ||||| || || ||||| || || | || Sbjct 71198 TAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGG 71257 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||| ||| ||||||| |||||| | ||| ||||| | | || || Sbjct 71258 AATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAAC 71317 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAA 44112 || | ||||| || ||||| |||||||| || || || Sbjct 71318 TTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776026117872