Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq292 136 3e-27 seq326 122 7e-23 seq275 120 3e-22 >seq292 Length=16354 Score = 136 bits (150), Expect = 3e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||||| ||| ||||||||||| ||||| ||||| Sbjct 6394 CCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGAT 6453 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||| |||||||| || ||| | || | | |||||||| || Sbjct 6454 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 6513 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||||||| ||| || | | ||| || ||| || ||| | Sbjct 6514 ATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACT 6573 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA 20214 || | |||||||||||| || || || ||||| |||||||||||||| || || Sbjct 6574 TCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTTGAA 6626 >seq326 Length=266662 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || ||||| |||||||||| ||| ||||||||||| || |||||||| Sbjct 240016 CCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCAGAT 240075 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||| |||||||| || ||| |||| | | |||||||| || Sbjct 240076 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGTGGA 240135 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| ||||||| ||| || | | ||| || || || ||| | Sbjct 240136 ATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCAACT 240195 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || || ||||| || ||||| |||||||| ||||||||||| Sbjct 240196 TCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| || || || |||||||||| ||| ||||||||||| |||||||| || Sbjct 239560 CCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239619 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || ||||| |||||||| || || |||| | | |||||||| || Sbjct 239620 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGTGGA 239679 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| || |||| || ||| | Sbjct 239680 ATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCAACT 239739 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||||| ||||| || || || ||||| || ||||||||||| Sbjct 239740 TCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | |||||||| | ||| ||||||||||| || |||||||| Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGAT 239391 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || |||||| |||||||| || || |||| | | ||||| || || Sbjct 239392 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGA 239451 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | | ||| || ||| || ||| | Sbjct 239452 ATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACT 239511 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || || ||||| || ||||| || || ||||| |||||||| Sbjct 239512 TCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || |||||||||| ||| ||||||||||| |||||||| || Sbjct 239788 CCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCTGAT 239847 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | | |||||||| || Sbjct 239848 AAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGTGGA 239907 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| ||| || | | | | || | ||| | Sbjct 239908 ATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCAACT 239967 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | |||||||| || || ||||| ||||| || ||||||||||| Sbjct 239968 TCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 >seq275 Length=119121 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| ||||| |||||||||| || ||||||||||| ||||||||||| Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||| |||||||| || ||| | || | | |||||||| || Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||||| ||| || | | ||| | ||| || ||| | Sbjct 71259 ATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACT 71318 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAA 20200 || | ||||||||| || || || || ||||| || ||| Sbjct 71319 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAAA 71357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419585338606284