Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq185 342 4e-89 >seq185 Length=130276 Score = 342 bits (378), Expect = 4e-89 Identities = 592/846 (70%), Gaps = 21/846 (2%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||||||||| || ||||||||||||||| || || ||||| || |||| ||||| || Sbjct 111601 TTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAATGAAATGTT 111542 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACA--ATAGTATTTTTTACACCCTAATTCTAGT 12976 |||||||||||| || |||||| | |||| |||| |||||||| ||||| | | | Sbjct 111541 TTCCATAAAATCAAATGGATTTGT--AACATTATAGAATTTTTTATTACCTAAAGCAACT 111484 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 || || | |||||| ||||| | || || |||||| | | ||||| |||| | Sbjct 111483 AATAAACGATCAGCACAGAACTCAACATATTGACACATTAATTTAGCATTCATACCTAAT 111424 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 || | || | ||| || || ||| | | ||| || ||| ||||| ||| Sbjct 111423 AAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATTCAATTGAAACAGCTTCAGTAATA 111364 Query 13097 ATGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGCTTAAACATCATACATGC 13155 || | | | | | |||| | |||| |||| || ||| ||| | | ||| || Sbjct 111363 ATTTTT-TCAACAATTTCTTCAGATGGTTTATTTTTTAAATGAGCAAATAATAAACAAGC 111305 Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215 ||||||| || || |||||||| | || |||| || |||||||| |||| ||| || Sbjct 111304 AAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAGTTAAACCAGG 111245 Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275 ||| | |||| |||||| | |||||| || | |||||| ||||| ||||| || || || Sbjct 111244 CATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAAAGAAAATACC 111185 Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACC--ATACGTACTATTTTTACTCT-CTAT 13332 |||||| || ||||| || | || |||||||| ||| | || || || | || Sbjct 111184 TTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATA---AAGCTTCTTCATCAGCAAT 111128 Query 13333 CCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAA 13392 ||| || ||||| | ||||||| ||||| || || |||| || || || || Sbjct 111127 CCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAGCATTGAA 111068 Query 13393 TAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTC 13452 |||||| | || || ||| |||||||||||| || ||||| ||| |||| Sbjct 111067 TAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATGAATAAGTTTC 111008 Query 13453 TGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTG 13512 ||||||||||||||||||| ||||||||||||||||||||| |||| |||| | || Sbjct 111007 TGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCTGGAATTTG 110948 Query 13513 AACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaa 13571 |||||| | || |||| |||| |||| ||||| ||||| || || || |||||||| Sbjct 110947 AACTTCAGCAGAGAAAT-TTTCAACTAAATTTTCATTAACAATACCATCTGAAGCAGCAA 110889 Query 13572 aaaaaGCAAGTATGTGCTT--AATAAAttttttttCGTTTTC-TGACAACTTTAA--CCA 13626 | ||||| | | ||| |||||| ||| || || | | |||| | ||| Sbjct 110888 AGAAAGCTA--AAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTCATTCCA 110831 Query 13627 ATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTT 13686 ||| ||| ||||||||||||||| | || ||| | |||||||| ||||| |||| || Sbjct 110830 ATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTCAGCTTT 110771 Query 13687 CTTATA 13692 ||||| Sbjct 110770 TTTATA 110765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430980488054328