Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq185 318 1e-81 seq292 196 1e-44 seq326 179 9e-40 seq275 178 3e-39 seq300 86.0 1e-11 seq102 86.0 1e-11 >seq185 Length=130276 Score = 318 bits (352), Expect = 1e-81 Identities = 604/872 (69%), Gaps = 33/872 (4%) Strand=Plus/Plus Query 268703 TTTGTGATATTTCCAATACAGCATGGTGATATATGG--AGGATGTACAAACAGGCCGTTG 268760 ||||| |||| ||||| | || ||| || ||| || || || ||| || | | Sbjct 110723 TTTGTTTTATTCCCAATTAAATATCATGAAATCTGGCAAGCATATAAAAAA--GCTGAAG 110780 Query 268761 CTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC-TTAATAGATTGGAA--AA 268817 |||| |||||||||| |||||| | ||| | || | || || || |||||||| || Sbjct 110781 CTTCATTTTGGACTGCTGAAGAAATTGATTTATCAAAAGATATTCAT-GATTGGAATGAA 110839 Query 268818 ATTTAAAACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGT 268876 | | ||| | || ||| | ||||| || || | || || ||||| | | Sbjct 110840 AGATTAAATGATAATGAACGTTTCTTTATTTCAAGAGTTTTAGCTTTCTTTGCTGCTTCA 110899 Query 268877 GATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAA 268936 |||||||| ||||| |||||| |||| || || |||| | || || || ||||| ||| Sbjct 110900 GATGGTATTGTTAATGAAAATTTAGTTGAAAATTTCTCTGCTGAAGTTCAAATTCCAGAA 110959 Query 268937 GCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGT 268996 || | ||||||||| || ||||| || || ||||||||||||||||| | || Sbjct 110960 GCTAAATGTTTTTATGGTTTCCAAATTATGATGGAAAATATTCATTCAGAAACTTATTCA 111019 Query 268997 CTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAA-GACTATTT--TC--TT 269051 ||||||| ||||||||||| | ||| | |||| || || ||||| || | Sbjct 111020 TTATTAATTGATACTTATATTAAAGAT-----CCAAAACAAGCTGAATATTTATTCAATG 111074 Query 269052 CTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAACG 269111 |||| ||| || ||| | | | ||||| |||| |||||| | | |||||| | Sbjct 111075 CTATTGAAACCATTCCATGTATTAAAGAAAAAGCTGATTGGGCTTTAAGATGGATTGCTG 111134 Query 269112 ATAGCGC-GCCTTA--CGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCT 269168 || | || ||| ||| ||||| |||||||||||||| ||||| |||||||| |||| Sbjct 111135 ATGAAGAAGCTTTATTCGGTGAAAGATTAGTTGCTTTTGCTGCTGTTGAAGGTATTTTCT 111194 Query 269169 TTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAA 269228 |||| || || ||||| | || ||||||||||| |||||||| | ||||| || |||| Sbjct 111195 TTTCTGGTTCATTTGCTTCAATTTTTTGGTTGAAAAAAAGAGGTTTAATGCCTGGTTTAA 111254 Query 269229 CTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTAT 269288 |||| || || ||||| || | | || ||||||||||| || || |||||||||| Sbjct 111255 CTTTTTCAAATGAATTAATTTGTCGTGATGAAGGTTTACATACTGATTTTGCTTGTTTAT 111314 Query 269289 TATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATT 269348 ||||| || ||| | | | ||||| ||| |||| | || | ||||||| | Sbjct 111315 TATTTGCTCATT---TAAAAAATAAACCATCTGAAGAAATTGTTGAAAAAATTATTACTG 111371 Query 269349 CAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTA-TCGGT 269407 ||||||||| | ||| | |||| | | || || ||| || | | | ||| | ||| Sbjct 111372 AAGCTGTTTCAATTGAATCTGAATATTTCACTGATGCTTTA-CCAGCTTCTTTATTAGGT 111430 Query 269408 ATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCT 269467 |||||| |||| ||| ||||| || ||||| ||||| | || | || || Sbjct 111431 ATGAATGCTAAATTAATGTGTCAATATGTTGAGTTCTGTGCTGATCGTTTATTAGTTGCT 111490 Query 269468 TTAGGGTTTAGTAAAAAA---TATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATA 269524 ||||| || ||||||| ||||| ||| |||||| ||| ||||||||| || || Sbjct 111491 TTAGG---TAATAAAAAATTCTATAATGTTACAAATCCATTTGATTTTATGGAAAACATT 111547 Query 269525 TCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556 ||||||| ||||| |||||||||| || || Sbjct 111548 TCATTAGCTGGTAAAACTAATTTCTTTGAAAA 111579 >seq292 Length=16354 Score = 196 bits (216), Expect = 1e-44 Identities = 182/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| || | |||| ||||||||| |||||||| ||||| ||||| |||||| Sbjct 6394 CCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTATAATCAGAT 6453 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | ||||||||| ||||||| |||||| |||||||| |||| | ||||||||||| || Sbjct 6454 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 6513 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||||||||| ||||| |||| ||| ||||| || | ||||| || ||| || Sbjct 6514 ATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAAGATTCAACT 6573 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 |||| ||||| || ||||| || | ||||| ||||| || ||||| ||| Sbjct 6574 TCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCATCTTG 6624 >seq326 Length=266662 Score = 179 bits (198), Expect = 9e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||||| ||||| || | ||| ||||| |||||||| |||||||| || |||||| Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGAT 239391 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 | |||||||| ||||||| |||||| ||||| ||||||| | ||||| ||||| || Sbjct 239392 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGA 239451 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 || ||||||||||| || || |||| ||| ||||| || | ||||| || ||| || Sbjct 239452 ATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACT 239511 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || ||||| |||||||| | || || ||||| || ||||| Sbjct 239512 TCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || | || | ||||||||| |||||||| ||||| || ||||| Sbjct 239557 ATACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 239616 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||||||||||||||| |||||| ||||| ||||||| | |||||||| || Sbjct 239617 GATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGATCTGGT 239676 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| || || |||| ||| || || || | |||||| || ||| Sbjct 239677 GGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGAAGATTCA 239736 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| |||||||| ||||| || | ||||| || || || ||||| Sbjct 239737 ACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 167 bits (184), Expect = 5e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || | || | ||||||||| |||||||| || ||||| || ||| Sbjct 240013 ATACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATATTGTAATCA 240072 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| |||||||||||||||| |||||| ||||||||||| | | ||||||||||| Sbjct 240073 GATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCAGGT 240132 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || || ||||| |||| ||| ||||| || | || || || ||| Sbjct 240133 GGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGTCTGAAGATTCA 240192 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| || ||||| |||||||| | ||||| || || || ||||| Sbjct 240193 ACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCAT 240242 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | ||||||||| |||||||| ||||| || ||||| Sbjct 239785 ATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 239844 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||| | ||| ||||||| |||||| ||||| ||||| | | ||||||||||| Sbjct 239845 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCAGGT 239904 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| || | ||| || || || | ||| || | ||| Sbjct 239905 GGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGTCTGATGATTCA 239964 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || |||| ||||| ||||||||||| | ||||| || || || ||||| Sbjct 239965 ACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCAT 240014 Score = 134 bits (148), Expect = 3e-26 Identities = 140/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | ||||||||| |||||||| ||||| || ||||| Sbjct 240241 ATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATGTTGTAGTCT 240300 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||| | ||| ||||||| |||||| ||||||||||| | | |||||||| || Sbjct 240301 GATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATCAAACGTTGTTGATCTGGT 240360 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||||||||| |||||||| | ||| || || || | || || || ||| Sbjct 240361 GGGATCCCTTCTTTATCTTGAATCTTGGATTTGACGTTATCAATAGTGTCAGAAGATTCA 240420 Query 104510 ACCT 104513 |||| Sbjct 240421 ACCT 240424 >seq275 Length=119121 Score = 178 bits (196), Expect = 3e-39 Identities = 172/221 (78%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||||| || | || | |||||| || |||||||| ||||| || || ||| Sbjct 71136 ATACCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCA 71195 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| ||||||||| ||||||| |||||| |||||||| |||| | ||||||||||| Sbjct 71196 GATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGT 71255 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || ||||| |||| ||| ||||| || | |||||| || ||| Sbjct 71256 GGAATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCA 71315 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 || |||| ||||| ||||||||||| | ||||| || || Sbjct 71316 ACTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 >seq300 Length=94169 Score = 86.0 bits (94), Expect = 1e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 165098 GATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAGCTA 165157 || || ||||||||| ||| ||||| || | | ||||||||||||||||| || || Sbjct 84345 GACAAAGATGAATGGGGTACATGGAAAAATAGAACAGATCCTGTTTTACATATTGAATTA 84286 Query 165158 AGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGATA 165217 | | ||||| ||||| | | | ||||| ||||| ||||| | |||| | || || Sbjct 84285 CGTCGTTGGGCTGATATTTTAATTGTTGCACCATTAACTGCAAATACTTTATCAAAAATT 84226 Query 165218 GCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAATA 165269 | | ||| | ||| |||| || ||||| | | ||||||| ||||||| Sbjct 84225 GGTTTAGGTCTTTGTGATAATTTATTAACAAATGTTATTAGAGCTTGGAATA 84174 >seq102 Length=19803 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 165098 GATAAGGATGAATGGAATACTTGGAATAAAATACACGATCCTGTTTTACATATAGAGCTA 165157 ||| | || |||||| | || || ||||| ||||| |||||||||| ||| || Sbjct 7782 GATGATGAAGAATGGTTTGGTTATAAAAAAATGGGAGATCCAGTTTTACATACAGAATTA 7723 Query 165158 AGAAGATGGGCAGATATGATGTTGATAGCACCCTTAACAGCAAACAGTTTAGCGAAGATA 165217 ||||||||||| ||||| ||||| || || |||| ||||| | |||||| || || Sbjct 7722 AGAAGATGGGCTGATATAATGTTAATTAGTCCTTTAAGTGCAAATACTTTAGCAAAAATT 7663 Query 165218 GCTAACGGTATCTGTAATAACTTGTTAACGTGTATAGTTAGAGCGTGGAA 165267 | || ||||| ||| |||| || || || ||| ||||| ||||| Sbjct 7662 TCGAATGGTATTTGTGATAATTTATTGACTGCTATCATTAGAAGCTGGAA 7613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393030165712