Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq292 120 3e-22 seq275 114 1e-20 seq326 105 6e-18 >seq292 Length=16354 Score = 120 bits (132), Expect = 3e-22 Identities = 169/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Plus Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831 |||||| | || ||||| |||| || || || || || || ||||| ||||| | |||| Sbjct 6386 TTTTAC-CACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTA 6444 Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891 ||||| | ||| | ||| || | ||||| || |||||||||| | ||| ||| Sbjct 6445 TAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGA 6504 Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951 || || |||||||||||||| || | |||||||| ||||| | | | ||| |||| Sbjct 6505 TCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAA 6564 Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || |||||||| || || | |||||| ||||| || ||||| Sbjct 6565 GATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620 >seq275 Length=119121 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| ||| ||||| || ||||| ||||| ||||| | ||| ||||| Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || | ||||| || |||||||||| | ||| ||||| || ||| Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||||||||| | |||||||| ||||| | | | || |||| || || Sbjct 71259 ATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACT 71318 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998 || | || ||||| || ||||| | |||||| || || Sbjct 71319 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356 >seq326 Length=266662 Score = 105 bits (116), Expect = 6e-18 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||||||||| ||| ||||| || || || ||||| ||||| | Sbjct 240004 AAAATTTGCATACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATA 240063 Query 94829 TTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || ||||| ||| ||| | || || | ||||| || |||| || || | || Sbjct 240064 TTGTAATCAG--ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTT 240121 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 | ||||| || ||||||||||| ||||| | |||||||| || || | | | ||||| Sbjct 240122 GTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGT 240181 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | || || || | ||||| ||||| ||||| | |||||| || || || |||| Sbjct 240182 CTGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCA 240241 Query 95007 T 95007 | Sbjct 240242 T 240242 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || ||||| |||| || ||||| || || || ||||| ||||| | | Sbjct 239776 AAAATTTGCATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATG 239835 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || || || | ||| || || ||| || | ||||| || | || || || | || Sbjct 239836 TTGTAGTC--TGATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTT 239893 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 | ||||| || ||||||||||||||||| | |||||| | || ||| ||| |||| Sbjct 239894 GTTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGT 239953 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | || || || | || ||||| || ||||| | |||||| || || || |||| Sbjct 239954 CTGATGATTCAACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCA 240013 Query 95007 T 95007 | Sbjct 240014 T 240014 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/237 (69%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || || |||||||||| || ||||| || || || ||||| ||||| | ||| | Sbjct 239552 TTTGCATACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGT 239611 Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || | ||| ||| | || || | ||||| || | || ||||| | ||| || Sbjct 239612 AGTC--TGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTG 239669 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 |||||| |||||||||||||| || | ||||||| |||||| | | ||| || | Sbjct 239670 ATCTGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGA 239729 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | || || ||||| || || | ||||| || || || ||||| Sbjct 239730 AGATTCAACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| |||| | ||||| ||||| || ||||| ||||| | || ||||| Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAG-- 239389 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 ||| ||| | ||| || | ||||| || | || ||||| | ||| || || || | Sbjct 239390 ATAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTG 239449 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||||||||| || | ||||||| || || | | | ||| || | || | Sbjct 239450 GAATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAA 239509 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||| ||||| ||||| | ||| || |||||||| ||||| Sbjct 239510 CTTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289160275040