Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq292 120 3e-22
seq275 114 1e-20
seq326 105 6e-18
>seq292
Length=16354
Score = 120 bits (132), Expect = 3e-22
Identities = 169/236 (72%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831
|||||| | || ||||| |||| || || || || || || ||||| ||||| | ||||
Sbjct 6386 TTTTAC-CACCACCTCTTAATCTTAAGACTAAATGTAATGTTGATTCTTTTTGAATGTTA 6444
Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891
||||| | ||| | ||| || | ||||| || |||||||||| | ||| |||
Sbjct 6445 TAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGA 6504
Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951
|| || |||||||||||||| || | |||||||| ||||| | | | ||| ||||
Sbjct 6505 TCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTGACATTGTCAATAGTATCAGAA 6564
Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | || |||||||| || || | |||||| ||||| || |||||
Sbjct 6565 GATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAACAAAAATTTGCAT 6620
>seq275
Length=119121
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| ||| ||||| || ||||| ||||| ||||| | ||| |||||
Sbjct 71139 CCACCTCTTAATCTCAAAACCAAATGTAAAGTTGATTCTTTTTGAATGTTGTAATCAGAT 71198
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || | ||||| || |||||||||| | ||| ||||| || |||
Sbjct 71199 AAAGTTCTACCATCTTCTAATTGTTTACCAGCAAAGATTAAACGTTGTTGATCAGGTGGA 71258
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||||||||| | |||||||| ||||| | | | || |||| || ||
Sbjct 71259 ATACCTTCTTTGTCTTGAATTTTTGATTTGACATTGTCAATGGTATCAGAAGATTCAACT 71318
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| | || ||||| || ||||| | |||||| || ||
Sbjct 71319 TCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAACGAA 71356
>seq326
Length=266662
Score = 105 bits (116), Expect = 6e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || |||||||||| ||| ||||| || || || ||||| ||||| |
Sbjct 240004 AAAATTTGCATACCACCTCTCAATCTCAAGACCAAATGTAATGTTGATTCTTTTTGGATA 240063
Query 94829 TTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| ||||| ||| ||| | || || | ||||| || |||| || || | ||
Sbjct 240064 TTGTAATCAG--ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAAATCAAACGTT 240121
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
| ||||| || ||||||||||| ||||| | |||||||| || || | | | |||||
Sbjct 240122 GTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATTGTCAATAGTGT 240181
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | || || || | ||||| ||||| ||||| | |||||| || || || ||||
Sbjct 240182 CTGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGACGAAAATTTGCA 240241
Query 95007 T 95007
|
Sbjct 240242 T 240242
Score = 96.9 bits (106), Expect = 3e-15
Identities = 167/241 (69%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || || ||||| |||| || ||||| || || || ||||| ||||| | |
Sbjct 239776 AAAATTTGCATACCACCTCTTAATCTTAAGACCAAATGTAATGTTGATTCTTTTTGAATG 239835
Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|| || || | ||| || || ||| || | ||||| || | || || || | ||
Sbjct 239836 TTGTAGTC--TGATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATCAAACGTT 239893
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
| ||||| || ||||||||||||||||| | |||||| | || ||| ||| ||||
Sbjct 239894 GTTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTTATCGATGGTGT 239953
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | || || || | || ||||| || ||||| | |||||| || || || ||||
Sbjct 239954 CTGATGATTCAACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAACGAAAATTTGCA 240013
Query 95007 T 95007
|
Sbjct 240014 T 240014
Score = 89.7 bits (98), Expect = 5e-13
Identities = 163/237 (69%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || |||||||||| || ||||| || || || ||||| ||||| | ||| |
Sbjct 239552 TTTGCATACCACCTCTCAATCTTAAAACCAAATGTAATGTTGATTCTTTTTGAATGTTGT 239611
Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890
| || | ||| ||| | || || | ||||| || | || ||||| | ||| ||
Sbjct 239612 AGTC--TGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTG 239669
Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950
|||||| |||||||||||||| || | ||||||| |||||| | | ||| || |
Sbjct 239670 ATCTGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTTATCAATAGTATCGGA 239729
Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | || || ||||| || || | ||||| || || || |||||
Sbjct 239730 AGATTCAACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAACGAAAATTTGCAT 239786
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| ||||| |||| | ||||| ||||| || ||||| ||||| | || |||||
Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAG-- 239389
Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898
||| ||| | ||| || | ||||| || | || ||||| | ||| || || || |
Sbjct 239390 ATAAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTG 239449
Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958
||||||||||||| || | ||||||| || || | | | ||| || | || |
Sbjct 239450 GAATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAA 239509
Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || | ||||| ||||| ||||| | ||| || |||||||| |||||
Sbjct 239510 CTTCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289160275040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |