Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq185 372 3e-98 >seq185 Length=130276 Score = 372 bits (412), Expect = 3e-98 Identities = 641/924 (69%), Gaps = 33/924 (4%) Strand=Plus/Minus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 |||||||||||| |||||||||||| || ||||| || || || | ||||| || Sbjct 111601 TTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGCTAATGAAATGTT 111542 Query 21244 TTCCATAAAATCAAATGGATTT-TCAGATT-TA-AATATTTTATTACAACCCAGTTCTGA 21300 |||||||||||||||||||||| | | ||| || ||| ||||||||| | | | Sbjct 111541 TTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTTTATTAC---CTAAAGCAAC 111485 Query 21301 TAATAATCTATCTGCTACA-AATTCTATATATTGACACATTAATTCACAATTCATACCGA 21359 |||||| | ||| || ||| || || | ||||||||||||||||| | ||||||||| | Sbjct 111484 TAATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATTTAGCATTCATACCTA 111426 Query 21360 TCAATTTTACAGGAAGAGCTTTTGTCAAAAA---AGATTTTTCTATAGAGACGGCTTCAA 21416 || | || | ||| | || ||| | ||||| | || || || |||||| Sbjct 111425 ATAAAGAAGCTGGTAAAGCATCAGTGAAATATTCAGATT---CAATTGAAACAGCTTCAG 111369 Query 21417 CAATTATATTT-----ATTATCCT-AGATGTACTAGGGGGATACAATAATTGTTTAAACA 21470 ||| || ||| | | || | ||||| || | ||| || ||| | Sbjct 111368 TAATAATTTTTTCAACAATTTCTTCAGATGGTTTA------TTTTTTAAATGAGCAAATA 111315 Query 21471 TCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATG 21530 ||||| ||||||||| ||| ||||||||||| | || ||||||||||| ||||| | Sbjct 111314 ATAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAATTCATTTGAAAAAG 111255 Query 21531 TTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAA 21590 ||||||| |||||||| ||||| ||||| |||||||| ||||| ||||||| || |||| Sbjct 111254 TTAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCAAATGAACCAGAAA 111195 Query 21591 AGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTAT 21650 ||||||| || ||||| |||||||| |||||||||| ||||||| || || ||||| || Sbjct 111194 AGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAATAAAGCTTCTTCAT 111135 Query 21651 CCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAG 21710 | |||||| || ||||| | || |||||||||||||| ||| || ||||||| Sbjct 111134 CAGCAATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGGAATGGTTTCAATAG 111075 Query 21711 CTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTAT 21770 | || || | || | || | | ||| | || || Sbjct 111074 CATTGAATAAATATTCAGCTTGTTTTGGATCTTTAATATAAGTATCAATTAATAATGAAT 111015 Query 21771 ACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTG 21830 | |||| ||||| |||||||| ||| || || || || ||||||||| | || |||| Sbjct 111014 AAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAAAACATTTAGCTTCTG 110955 Query 21831 AACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGG 21890 | |||||| || | | | || || | | || |||||||| || || ||||| | Sbjct 110954 GAATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAACAATACCATCTGAAG 110895 Query 21891 CGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTT---T 21947 | ||||| || || || | || ||||| | ||||| ||||| ||||| || | Sbjct 110894 CAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTATCATTTAATCTTTCAT 110835 Query 21948 TCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAG 22007 ||||||| | ||||||||||||||| | |||||||| |||||||| ||| || Sbjct 110834 TCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGTCCAAAATGAAGCTTCAG 110775 Query 22008 CCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACC--TGTT 22065 | |||||||| |||||| |||| |||| | ||||| |||| ||||| | ||| Sbjct 110774 CTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAATAAAACAAAACGACGTT 110715 Query 22066 ATTTGATTCAACTAAAAGTGGTTC 22089 || ||||||||| | |||||| Sbjct 110714 TATT--TTCAACTAATAATGGTTC 110693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531898379851360