Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq326 120 3e-22 seq292 118 1e-21 seq275 118 1e-21 >seq326 Length=266662 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || ||||| || | || || | ||| | |||||| Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| || ||| ||||||||||| || || || |||||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | |||| || || |||||| | ||||||| | | | | | | | ||||| || Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTA-CTTTATCAGACTACAA 239836 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||| || | ||| ||||| | ||| | ||||| || Sbjct 239835 CATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGG 239788 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| ||||| || ||| | || || | ||| | ||||| | Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | |||||| ||| || || |||||||| || || || |||||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| || || |||||| | ||||| | ||||| | | ||||| ||| Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAAC 239607 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| || | ||| |||| | ||| | ||||| || Sbjct 239606 ATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGG 239560 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| ||| | ||||| | ||| | ||||| Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| ||| || || |||||||| || || || || ||| Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAA 239439 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| || || |||||| | ||||||| ||||| | | || || || Sbjct 239438 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAAT 239379 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| || | ||| ||||||| ||| | ||||| || Sbjct 239378 ATTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGG 239332 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| || ||||| ||| | ||||| | ||| | ||||| Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| ||| ||| ||||| ||||| || || || |||||| Sbjct 240182 GACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 240123 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| | || |||||| | ||||| | ||||| | | || || || Sbjct 240122 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAAT 240063 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||||||||| || | ||| ||||| ||||| | ||||| || Sbjct 240062 ATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| || ||||||||||| || || |||||| Sbjct 240410 GACACTATTGATAACGTCAAATCCAAGATTCAAGATAAAGAAGGGATCCCACCAGATCAA 240351 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 ||| | | |||| | || |||||| | ||||||| | | | | | | | ||||| || Sbjct 240350 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTCGTA-CTTTATCAGACTACAA 240292 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||| || | ||| ||||| | ||| | ||||| || Sbjct 240291 CATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGG 240244 >seq292 Length=16354 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| |||||| | ||||| ||||| ||||| || ||| | || ||| | ||| | ||||| Sbjct 6624 CAAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATC 6565 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || || || | |||||| ||| ||| || |||||||| || || || || Sbjct 6564 TTCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGA 6505 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACT 26943 ||||||| | | || | | || |||||| | ||||||| ||||| | | | | || | Sbjct 6504 TCAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAA-CTTTATCTGATT 6446 Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||||| || | ||| | ||| | ||| | ||||| || Sbjct 6445 ATAACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGG 6394 >seq275 Length=119121 Score = 118 bits (130), Expect = 1e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || ||||| |||||||| || | || ||| | ||| | ||||| || ||||| Sbjct 71356 TTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATT 71297 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | |||||| ||| ||| ||||||||||| || || || ||||||||| | | Sbjct 71296 GACAATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTTA 71237 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAA 26956 || | | || |||||| | ||||||| ||||| | | | | || || ||||||||||| Sbjct 71236 ATCTTTGCTGGTAAACAATTAGAAGATGGTAGAA-CTTTATCTGATTACAACATTCAAAA 71178 Query 26957 AGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| ||| | ||| |||| ||||| | ||||| || Sbjct 71177 AGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG 71139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660222086080