Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq185 295 2e-74 seq291 111 4e-19 >seq185 Length=130276 Score = 295 bits (326), Expect = 2e-74 Identities = 638/939 (68%), Gaps = 29/939 (3%) Strand=Plus/Plus Query 22032 TGAGCCACTTCTTA-TTGAGAATAAAGATCGTTTCGTACTATTTCCGATTGTACACGAAG 22090 ||| ||| || ||| |||| |||||| |||||| || |||| || ||| | | | | Sbjct 110692 TGAACCA-TTATTAGTTGAAAATAAACGTCGTTTTGTTTTATTCCCAATTAAATATCATG 110750 Query 22091 ATATTTATGAAGAATACAAGAAAGCAGAAGCTTCCCTATGGGGTGTTTCCGAAATTGATA 22150 | || | ||| ||| || ||||| |||||||| | ||| || | ||||||||| Sbjct 110751 AAATCTGGCAAGCATATAAAAAAGCTGAAGCTTCATTTTGGACTGCTGAAGAAATTGATT 110810 Query 22151 TTTCCACTGATAAGACGGATTGGCC--AAAACTTACA-GAAAACGAACAACATTTTATCA 22207 | || | |||| |||||| ||| ||| | || || |||| ||||| Sbjct 110811 TATCAAAAGATATTCATGATTGGAATGAAAGATTAAATGATAATGAACGTTTCTTTATTT 110870 Query 22208 AATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTA 22267 | || |||| ||||||||| | |||| ||||| ||| ||| ||| |||| | Sbjct 110871 CAAGAGTTTTAGCTTTCTTTGCTGCTTCAGATGGTATTGTTAATGAAAATTTAGTTGAAA 110930 Query 22268 ATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGA 22327 |||| | ||||| ||||| ||||| || | |||||| |||||| | ||||| |||| Sbjct 110931 ATTTCTCTGCTGAAGTTCAAATTCCAGAAGCTAAATGTTTTTATGGTTTCCAAATTATGA 110990 Query 22328 TTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAG 22387 | |||||| |||| | ||||| ||||| || || || | | | | || | ||||| Sbjct 110991 TGGAAAATATTCATTCAGAAACTTATTC-ATTAT--TA-ATTGATACTTATAT--TAAAG 111044 Query 22388 ACGAACAAC-----GAA-ACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATA 22441 | | ||| ||| | |||||| || ||| ||||||| || ||||| | | Sbjct 111045 ATCCAAAACAAGCTGAATATTTATTCAATGCTATTGAAACCATTCCATGTATTAAAGAAA 111104 Query 22442 AGGCAGATTGGGCGCTGAAATGGAT----GAACAATGAACGTTCATTCGCGGAACGTCTT 22497 | || |||||||| | | |||||| || || ||| || ||||| ||| | | Sbjct 111105 AAGCTGATTGGGCTTTAAGATGGATTGCTGATGAA-GAAGCTTTATTCGGTGAAAGATTA 111163 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 |||| ||||||| |||||||| |||||||||||||| ||||| | |||| |||||| Sbjct 111164 GTTGCTTTTGCTGCTGTTGAAGGTATTTTCTTTTCTGGTTCATTTGCTTCAATTTTTTGG 111223 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 | |||||| | | | ||||| ||| |||| ||||||||||| |||||| | || ||| Sbjct 111224 TTGAAAAAAAGAGGTTTAATGCCTGGTTTAACTTTTTCAAATGAATTAATTTGTCGTGAT 111283 Query 22618 GAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTT 22677 || ||| | ||||| |||||||| ||| | ||| | |||| | | |||||| Sbjct 111284 GAAGGTTTACATACTGATTTTGCTTGTTTATTATTT---GCTCATTTAAAAAATAAACCA 111340 Query 22678 CCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATT 22737 | | |||| ||| | |||||||| | || ||| | ||||| ||| |||| Sbjct 111341 TCTGAAGAAATTGTTGAAAAAATTATTACTGAAGCTGTTTCAATTGAA--TCTGAATATT 111398 Query 22738 T--GCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATA 22795 | || || ||||||| | | | ||||| ||||| ||| |||| || |||| Sbjct 111399 TCACTGATGCTTTACCAGCTTCTTTATTAGGTATGAATGCTAAATTAATGTGTCAATATG 111458 Query 22796 TTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCG 22855 || | || ||| |||||| ||||| || | | ||| || ||| ||||| || Sbjct 111459 TTGAGTTCTGTGCTGATCGTTTATTAGTTGCTTTAGGTAATAAAAAATTCTATAATGTTA 111518 Query 22856 TTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAA 22915 ||||||||||| | |||||| |||||| | | || || || |||||||| |||| Sbjct 111519 CAAATCCATTTGATTTTATGGAAAACATTTCATTAGCTGGTAAAACTAATTTCTTTGAAA 111578 Query 22916 AAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATG 22954 |||||||| || || |||||||| |||||||||| || Sbjct 111579 AAAGAGTTTCAGATTATCAAAAAGCTGGTGTTATGGCTG 111617 >seq291 Length=72889 Score = 111 bits (122), Expect = 4e-19 Identities = 389/598 (65%), Gaps = 31/598 (5%) Strand=Plus/Plus Query 111362 AGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGT 111421 |||| | || |||||||||| || ||||| ||| || || | | |||| ||| Sbjct 10534 AGAATTACTTTGGTTTATTCAAGGTTGTACAGATGGTAAAAAATTAAGTGAAAAAGGTGT 10593 Query 111422 AAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACA- 111480 ||||||||||| || |||||| ||||| ||| ||||| | | ||| | || | Sbjct 10594 TAAAATTTGGGAAGGTAATGGAAGTCGTGAATTTTTAGATAAATTAGGTTTAACTGATAG 10653 Query 111481 ACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACT 111540 ||| ||||||||| | || |||||||| ||||| |||||| | || || ||||| | | Sbjct 10654 ACG-TGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTCGGTGCTAAAT 10712 Query 111541 ACAAAACCATGCACGACTCATATGATTCA---CAGGGAACTGATCAATTA-CAGAATGTC 111596 | || || | || ||||| || || |||||||||| | ||| || Sbjct 10713 ---ATACTGATTGTGATGCTGATTATTCAGGTCAAGGTGTTGATCAATTAGCTGAA-GTT 10768 Query 111597 ATTGATCAAATTAAGAAC-AACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 ||| || ||||| | ||| || || | |||||| ||||| ||| ||||||||| || Sbjct 10769 ATTCAT-AAATTGAAAACAAATCCTTATGATCGTCGTATTATAATGTCTGCATGGAATCC 10827 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT--- 111712 | | || || |||||| | |||||||||||| || | | || |||||||| Sbjct 10828 ACCAGATTTCCCAATTATGGCATTACCACCATGTCATGTTTTTTCACAATTTTATGTTAA 10887 Query 111713 ------ACACGACGGGATGC------TTTCATGCCAAATGTATCAGCGATCTGCTGATAT 111760 | || || | | | ||||| | | ||||| ||||| ||||| Sbjct 10888 TTTTCCTAAAGAAGGTAAACCACAATTATCATGTTTATTATATCAAAGATCTTGCGATAT 10947 Query 111761 TGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820 |||||||| ||||| ||||||||||| ||| || || | ||| | || || | Sbjct 10948 GGGTCTTGGAGTTCCTTTTAATATTGCTTCTTATGCTTTATTAACTAAAATGATTGCAAA 11007 Query 111821 TTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACAC 111880 || || | | |||||||| || || ||| || ||| | |||||||| | Sbjct 11008 AGTTGTTGATATGGATTGTGGTGAATTTATACATACTATGGGTGATTCTCATGTTTATAA 11067 Query 111881 AAACCACATTGATGCACTTAA--AACACAGTTGAAGCGCAAACCATACGATTTCCCAA 111936 | | || ||||||| | || |||| | | ||| | |||| || || ||||||| Sbjct 11068 AGATCATGTTGATGCTTTAAAAGAACAAATTACAAGAG--AACCTTATGAATTCCCAA 11123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347521484648