Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq326 168 6e-37 seq292 168 6e-37 seq275 145 7e-30 >seq326 Length=266662 Score = 168 bits (186), Expect = 6e-37 Identities = 176/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||||||||| |||||| | ||||| | ||||| || || || Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || ||||| || || || || ||||||| || |||||||| ||||||||||||| Sbjct 239498 GATACTATTGA--CAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACC 239441 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | ||||| || || |||||||||||||||| | | || | ||||||| Sbjct 239440 AACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACA 239381 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||||| || | ||||| || || || ||||||| || Sbjct 239380 ATATTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGG 239332 Score = 165 bits (182), Expect = 7e-36 Identities = 176/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || |||||||| ||||| |||| || | ||||| || || || Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | || | |||| ||| ||||||||||| ||||||||||| | Sbjct 239954 GACACCATCGA-TAACGTTAAATCCAAAATTCAA-GACAAAGAAGGTATTCCACCTGATC 239897 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | ||||| || || |||||||||||||||| ||| ||| | || |||| Sbjct 239896 AACAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACA 239837 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||||||||| || ||||||| || |||| ||||||| || Sbjct 239836 ACATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGGTGG 239788 Score = 154 bits (170), Expect = 1e-32 Identities = 174/230 (76%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || |||||||| |||||| | ||||| | ||||| || || || Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || || |||||| ||| ||||| ||||| ||||||||||| Sbjct 240182 GACACTATTGA--CAATGTTAAATCAAAAATTCAA-GACAAGGAAGGTATTCCACCTGAT 240126 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | |||||||| || |||||||||||||| | | | || | |||||| Sbjct 240125 CAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTAC 240066 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| ||||||||||| || ||||||| || | || | ||||| || Sbjct 240065 AATATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGG 240016 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || || || |||||| | || || | ||||| || || || Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || | || | || ||||||| || |||||||| |||||||| || || Sbjct 239726 GATACTATTGA-TAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCA 239668 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||| || || |||||||||||||| | | | || | || ||||| Sbjct 239667 ACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAA 239608 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || ||||||| || |||| | ||||| || Sbjct 239607 CATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGG 239560 Score = 122 bits (134), Expect = 8e-23 Identities = 138/183 (75%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 25047 GTGGAGTCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGG 25102 || || || ||||||||||| || |||| || | || | ||| || |||||||| Sbjct 240422 GTTGAATCTTCTGACACTATTGATAACGTCA---AATCCAAGATTCAA-GATAAAGAAGG 240367 Query 25103 GATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCAC 25162 ||| ||||| || ||||| || | |||||||| || |||||||||||||||| ||| || Sbjct 240366 GATCCCACCAGATCAACAACGTTTGATTTTTGCTGGTAAACAATTAGAAGATGGTCGTAC 240307 Query 25163 TGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGG 25222 | | || ||||| |||||||||||||| || ||||||| || |||| ||||||| Sbjct 240306 TTTATCAGACTACAACATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATTAAGAGG 240247 Query 25223 AGG 25225 || Sbjct 240246 TGG 240244 >seq292 Length=16354 Score = 168 bits (186), Expect = 6e-37 Identities = 177/230 (77%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || |||||| |||| || | ||||| || || ||| Sbjct 6620 ATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCTTCT 6561 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || || || || |||||| ||| || |||||||| ||||||||||| Sbjct 6560 GATACTATTGA--CAATGTCAAATCAAAAATTCAA-GATAAAGAAGGTATTCCACCTGAT 6504 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | || ||||| || |||||||||||||||| | | ||| | ||||| Sbjct 6503 CAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTAT 6444 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || |||||||||||||| || |||||||||| |||| ||||||| || Sbjct 6443 AACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGG 6394 >seq275 Length=119121 Score = 145 bits (160), Expect = 7e-30 Identities = 172/229 (75%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || || ||||| || ||||| |||| || | ||||| || || ||||| || || Sbjct 71356 TTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATT 71297 Query 25068 GAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || || |||||| ||| ||||||||||| ||||||||||| ||||| || Sbjct 71296 GA--CAATGTCAAATCAAAAATTCAA-GACAAAGAAGGTATTCCACCTGATCAACAACGT 71240 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || ||||| || |||||||||||||||| | | ||| | |||||||| |||||| Sbjct 71239 TTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAA 71180 Query 25185 AAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233 |||||||| || ||||||| || | || ||||||| || |||||| Sbjct 71179 AAAGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG-TATTATT 71132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326077648660