Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq185 300 2e-76 >seq185 Length=130276 Score = 300 bits (332), Expect = 2e-76 Identities = 625/913 (68%), Gaps = 41/913 (4%) Strand=Plus/Minus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 |||||||||| |||||| || || |||| |||||||||||||||| || || || | Sbjct 111613 CATAACACCAGCTTTTTGATAATCTGAAACTCTTTTTTCAAAGAAATTAGTTTTACCAGC 111554 Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTCA---C 92903 || || || | ||| || | |||||| | | ||||| | |||| | | Sbjct 111553 TAATGAAAT-GTTTTCCATAAAATCAAATGGATTTGTAACATTATAGAATTTTTTATTAC 111495 Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACA-AATTCTATGTACTGAGACATCAAAT 92960 | | ||||| ||||| | |||||| ||| || || | || ||| |||| || | Sbjct 111494 CTAAAGCAACT-----AATAAACGATCAGC-ACAGAACTCAACATATTGACACATTAATT 111441 Query 92961 CACAATTCATTCCTAG--AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGAT 93018 | |||||| |||| |||| | | |||| ||| || || || | || || || Sbjct 111440 TAGCATTCATACCTAATAAAGAAG--CTGGTAAAGCATCAGTGAAATATTCAGATTCAAT 111383 Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATTT-----GGTGGTTTTTGTACG 93073 | ||| ||||| | | |||| | || || |||| | |||||| | | Sbjct 111382 TGAAACAGCTTCAGTAATAATTTTT-----TCAACAATTTCTTCAGATGGTTTATTTTTT 111328 Query 93074 ACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133 | || | | | ||| || ||||| || |||||||||||||| || || | || || Sbjct 111327 AAATGAGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCACGACAAATTAAT 111268 Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||| || |||||||| || | | |||| ||| || | |||||| ||||||||| Sbjct 111267 TCATTTGAAAAAGTTAAACCAGGCATTAAACCTCTTTTTTTCAACCAAAAAATTGAAGCA 111208 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || ||||||||| || |||||||| || || ||||| || || | | ||| | || Sbjct 111207 AATGAACCAGAAAAGAAAATACCTTCAACAGCAGCAAAAGCAACTAATCTTTCACCGAAT 111148 Query 93254 TTTGCGGAATTA-CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 || | | | || |||||| ||||||||||||| ||||||| |||||||| || Sbjct 111147 AAAGCTTCTTCATCAGCA-ATCCATCTTAAAGCCCAATCAGCTTTTTCTTTAATACATGG 111089 Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCG-TCCGAATCTCGTATGTATGTAT 93371 | ||||| ||||| || |||| || || ||| | | | |||| || || |||| Sbjct 111088 AATGGTTTCAATAGCATTGAATAAATATTC-AGCTTGTTTTGGATCTTTAATATAAGTAT 111030 Query 93372 CGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGA 93431 | ||||| | ||||| |||| ||||| | ||| ||||| ||||||||| || || | Sbjct 111029 CAATTAATAATGAATAAGTTTCTGAATGAATATTTTCCATCATAATTTGGAAACCATAAA 110970 Query 93432 AACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGA 93491 ||||| ||||||| | || || ||||| ||| || | || || | ||||||||| | Sbjct 110969 AACATTTAGCTTCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACTAAATTTTCATTAA 110910 Query 93492 CTATACCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATA-AAATGTTTCTCAT 93548 | |||||||| || || ||||| ||||| || | || || | ||| ||| | || Sbjct 110909 CAATACCATCTGAAGCAGCAAAGAAAGCTAAAACTCTTGAAATAAAGAAACGTTCATTAT 110850 Query 93549 CATCTTTAAGCTT--ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGT 93606 || ||||| ||| || |||||| | ||||||||| | ||| | |||||| |||| Sbjct 110849 CA--TTTAATCTTTCATTCCAATCATGAATATCTTTTGATAAATCAATTTCTTCAGCAGT 110792 Query 93607 CCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAA 93666 |||||| || ||||| |||||||| || | ||| || || ||||||| |||||| || Sbjct 110791 CCAAAATGAAGCTTCAGCTTTTTTATATGCTTGCCAGATTTCATGATATTTAATTGGGAA 110732 Query 93667 TATGACAAAACGA 93679 || ||||||||| Sbjct 110731 TAAAACAAAACGA 110719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858266283360