Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09-
21] 364 sequences; 15,901,152 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq292 192 5e-44
seq326 181 9e-41
seq275 181 9e-41
seq185 91.5 1e-13
>seq292
Length=16354
Score = 192 bits (212), Expect = 5e-44
Identities = 175/221 (79%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
||||||||||||||||||||||||||||| |||||||| | || | ||||| ||| |
Sbjct 6623 AAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCT 6564
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | ||| || ||||| |||||||||||| || || ||||||||||| |||
Sbjct 6563 TCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGAT 6504
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||||||| | || ||||| || ||||| ||||| ||| | || | || |||||
Sbjct 6503 CAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTAT 6444
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
||||||||||||||||| || |||||||||| || ||||
Sbjct 6443 AACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATT 6403
>seq326
Length=266662
Score = 181 bits (200), Expect = 9e-41
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || |||||||| || |||||||| ||||| | ||||| ||| | |
Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || | ||| |||||||||||||||||| ||||||||||| ||||||
Sbjct 240182 GACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 240123
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || ||||| ||||| || | ||| | || ||||||||
Sbjct 240122 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAAT 240063
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| ||||||||||| || ||||||| || ||| ||||| | || |||
Sbjct 240062 ATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGGT 240015
Score = 172 bits (190), Expect = 5e-38
Identities = 175/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| |||||||| ||||| |||||||| | ||| | ||||| ||| | ||
Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | ||||| |||||| ||||| || || ||||||||||| ||||||
Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || || ||||| ||||| || | ||| | || || ||||||
Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAAC 239607
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||||||||| || ||||||| ||||| ||||| | || |||
Sbjct 239606 ATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGGT 239559
Score = 159 bits (176), Expect = 3e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| ||||||||||| || ||||| || | ||| | ||||| ||| | |
Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | | ||| |||||||||||||| || ||||||||||| ||||||
Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || || ||||| ||||| ||| || || | || || ||||||
Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 239835
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||||||||| || ||||||| || || ||||
Sbjct 239834 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATT 239797
Score = 156 bits (172), Expect = 4e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| |||||||| ||||| || |||||||| ||||| | ||||| ||| | |
Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || | ||| |||||| ||||| || || ||||||||||| || |||
Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAA 239439
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || || || || ||||| ||||| ||| | ||| | || ||||||||
Sbjct 239438 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAAT 239379
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|||||||||||||| || | ||||| ||
Sbjct 239378 ATTCAAAAAGAATCAACATTGCATTTGGT 239350
Score = 107 bits (118), Expect = 2e-18
Identities = 109/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354
||||| || |||||||| || || || || ||||| |||||||||||| | || ||||
Sbjct 240394 TCAAATCCAAGATTCAAGATAAAGAAGGGATCCCACCAGATCAACAACGTTTGATTTTTG 240335
Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414
| || ||||| ||||| ||| || || | || || |||||||||||||||||||| |
Sbjct 240334 CTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAACATTCAAAAAGAATCAA 240275
Query 22415 CCATACATTTAGTTTTGCGATT 22436
| ||||||| || || ||||
Sbjct 240274 CATTACATTTGGTCTTAAGATT 240253
>seq275
Length=119121
Score = 181 bits (200), Expect = 9e-41
Identities = 174/223 (78%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| |||||||||||||| ||||| || | || | ||||| ||| | | |||||| |
Sbjct 71357 TTTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCAT 71298
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || ||||| ||||||||||||||| || ||||||||||| |||||||||||| |
Sbjct 71297 TGACAATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTT 71238
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || ||||| ||||| ||| | || | || |||||||||||||||||
Sbjct 71237 AATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAA 71178
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||| || ||||||| |||||| |||| | || ||| ||
Sbjct 71177 AGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGGTATT 71135
>seq185
Length=130276
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 117069 GCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATC 117128
||||| || ||| ||||| ||||||||||| || |||||| | || |||| |
Sbjct 111167 GCTTTTGCTGCTGTTGAAGGTATTTTCTTTTCTGGTTCATTTGCTTCAATTTTTTGGTTG 111226
Query 117129 AAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAA 117188
|| | | |||| ||||||| ||| |||| ||| || |||||||| | ||||| |||
Sbjct 111227 AAAAAAAGAGGTTTAATGCCTGGTTTAACTTTTTCAAATGAATTAATTTGTCGTGATGAA 111286
Query 117189 GGTTTACACACCGATTTTGCGTG 117211
|||||||| || |||||||| ||
Sbjct 111287 GGTTTACATACTGATTTTGCTTG 111309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726137981660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |