Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq292 192 5e-44 seq326 181 9e-41 seq275 181 9e-41 seq185 91.5 1e-13 >seq292 Length=16354 Score = 192 bits (212), Expect = 5e-44 Identities = 175/221 (79%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||||||||||||||||||||| |||||||| | || | ||||| ||| | Sbjct 6623 AAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATCT 6564 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | ||| || ||||| |||||||||||| || || ||||||||||| ||| Sbjct 6563 TCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTGAT 6504 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||||||| | || ||||| || ||||| ||||| ||| | || | || ||||| Sbjct 6503 CAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTAT 6444 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 ||||||||||||||||| || |||||||||| || |||| Sbjct 6443 AACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATT 6403 >seq326 Length=266662 Score = 181 bits (200), Expect = 9e-41 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || |||||||| || |||||||| ||||| | ||||| ||| | | Sbjct 240242 ATGCAAATTTTCGTCAAAACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 240183 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | ||| |||||||||||||||||| ||||||||||| |||||| Sbjct 240182 GACACTATTGACAATGTTAAATCAAAAATTCAAGACAAGGAAGGTATTCCACCTGATCAA 240123 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || ||||| || ||||| ||||| || | ||| | || |||||||| Sbjct 240122 CAACGTTTGATTTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAAT 240063 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||||||||| || ||||||| || ||| ||||| | || ||| Sbjct 240062 ATCCAAAAAGAATCAACATTACATTTGGTCTTGAGATTGAGAGGTGGT 240015 Score = 172 bits (190), Expect = 5e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| |||||||| ||||| |||||||| | ||| | ||||| ||| | || Sbjct 239786 ATGCAAATTTTCGTTAAAACCTTAACAGGTAAAACTATTACTTTAGAAGTTGAATCTTCC 239727 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | ||||| |||||| ||||| || || ||||||||||| |||||| Sbjct 239726 GATACTATTGATAACGTCAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCAGATCAA 239667 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| ||||| || | ||| | || || |||||| Sbjct 239666 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCAGACTACAAC 239607 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||| || ||||||| ||||| ||||| | || ||| Sbjct 239606 ATTCAAAAAGAATCAACATTACATTTGGTTTTAAGATTGAGAGGTGGT 239559 Score = 159 bits (176), Expect = 3e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| ||||||||||| || ||||| || | ||| | ||||| ||| | | Sbjct 240014 ATGCAAATTTTCGTTAAAACTTTGACTGGTAAGACCATTACTTTAGAAGTTGAATCATCA 239955 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| |||||||||||||| || ||||||||||| |||||| Sbjct 239954 GACACCATCGATAACGTTAAATCCAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAA 239895 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| ||||| ||| || || | || || |||||| Sbjct 239894 CAACGTTTGATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAAC 239835 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||||||||||| || ||||||| || || |||| Sbjct 239834 ATTCAAAAAGAATCAACATTACATTTGGTCTTAAGATT 239797 Score = 156 bits (172), Expect = 4e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| |||||||| ||||| || |||||||| ||||| | ||||| ||| | | Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | ||| |||||| ||||| || || ||||||||||| || ||| Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTGACCAA 239439 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || ||||| ||||| ||| | ||| | || |||||||| Sbjct 239438 CAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTACAAT 239379 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 |||||||||||||| || | ||||| || Sbjct 239378 ATTCAAAAAGAATCAACATTGCATTTGGT 239350 Score = 107 bits (118), Expect = 2e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354 ||||| || |||||||| || || || || ||||| |||||||||||| | || |||| Sbjct 240394 TCAAATCCAAGATTCAAGATAAAGAAGGGATCCCACCAGATCAACAACGTTTGATTTTTG 240335 Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414 | || ||||| ||||| ||| || || | || || |||||||||||||||||||| | Sbjct 240334 CTGGTAAACAATTAGAAGATGGTCGTACTTTATCAGACTACAACATTCAAAAAGAATCAA 240275 Query 22415 CCATACATTTAGTTTTGCGATT 22436 | ||||||| || || |||| Sbjct 240274 CATTACATTTGGTCTTAAGATT 240253 >seq275 Length=119121 Score = 181 bits (200), Expect = 9e-41 Identities = 174/223 (78%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| |||||||||||||| ||||| || | || | ||||| ||| | | |||||| | Sbjct 71357 TTTCGTTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCAT 71298 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || ||||| ||||||||||||||| || ||||||||||| |||||||||||| | Sbjct 71297 TGACAATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTGATCAACAACGTTT 71238 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| || ||||| ||||| ||| | || | || ||||||||||||||||| Sbjct 71237 AATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAA 71178 Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 |||||| || ||||||| |||||| |||| | || ||| || Sbjct 71177 AGAATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGGTATT 71135 >seq185 Length=130276 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 117069 GCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCATATTTTTTATC 117128 ||||| || ||| ||||| ||||||||||| || |||||| | || |||| | Sbjct 111167 GCTTTTGCTGCTGTTGAAGGTATTTTCTTTTCTGGTTCATTTGCTTCAATTTTTTGGTTG 111226 Query 117129 AAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATCGCGTGACGAA 117188 || | | |||| ||||||| ||| |||| ||| || |||||||| | ||||| ||| Sbjct 111227 AAAAAAAGAGGTTTAATGCCTGGTTTAACTTTTTCAAATGAATTAATTTGTCGTGATGAA 111286 Query 117189 GGTTTACACACCGATTTTGCGTG 117211 |||||||| || |||||||| || Sbjct 111287 GGTTTACATACTGATTTTGCTTG 111309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726137981660