Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq292 113 3e-20 seq275 98.7 7e-16 seq326 87.8 1e-12 >seq292 Length=16354 Score = 113 bits (124), Expect = 3e-20 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| ||| ||||||| ||||| || |||||||||||| | ||| ||| | Sbjct 6624 CAAGATGCAAATTTTTGTTAAAACTTTAACAGGTAAAACCATTACCTTAGAAGTTGAATC 6565 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | || || | | | || | || ||||||| |||||||| ||| | ||||| Sbjct 6564 TTCTGATACTATTGACAATGTCAAATCAAAAATTCAAGATAAAGAAGGTATTCCACCTG- 6506 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 | ||||| | | ||||||||||| |||||| |||||||| | |||| | | || Sbjct 6505 --ATCAACAACGTTTAATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGA 6448 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| || ||||| || ||||| || | ||| | || ||| | ||| |||| || Sbjct 6447 TTATAACATTCAAAAAGAATCAACATTACATTTAGTCTTAAGATTAAGAGGTGG 6394 >seq275 Length=119121 Score = 98.7 bits (108), Expect = 7e-16 Identities = 157/223 (70%), Gaps = 7/223 (3%) Strand=Plus/Minus Query 21847 TTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCAGAAACGGTGGCCG 21906 ||||||| ||||| || || ||||||||| | ||| ||| | | || || | | | Sbjct 71352 TTAAAACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGATACCATTGACA 71293 Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTA 21963 || | || ||||||| || ||||| ||| | ||||| | ||||| | | | Sbjct 71292 ATGTCAAATCAAAAATTCAAGACAAAGAAGGTATTCCACCTG---ATCAACAACGTTTAA 71236 Query 21964 TCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGG 22023 |||||||||| |||||| |||||||| | |||| | | |||||||| ||||| || | Sbjct 71235 TCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTTTATCTGATTACAACATTCAAAAAG 71176 Query 22024 AATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTA 22066 |||| ||| | ||| |||| || | ||| |||| || ||||| Sbjct 71175 AATCAACTTTACATTTGGTTTTGAGATTAAGAGGTGG-TATTA 71134 >seq326 Length=266662 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| |||| || || || || ||||| || || | ||| ||| | || Sbjct 239558 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCA 239499 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | || |||| |||||| |||||||| ||| | ||||| || Sbjct 239498 GATACTATTGACAATGTTAAATCAAAAATCCAAGATAAAGAAGGTATTCCACCTG---AC 239442 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| | | || || ||||| |||||| |||||||| | ||| | | |||||| Sbjct 239441 CAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGGTAGAACCTTATCTGATTAC 239382 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||| || ||||| || | ||| |||| | | ||| |||| || Sbjct 239381 AATATTCAAAAAGAATCAACATTGCATTTGGTCCTTAGATTAAGAGGTGG 239332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358123211268856