Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq326 125 2e-23 seq292 107 5e-18 seq275 96.9 8e-15 >seq326 Length=266662 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | ||| | || ||||||||| ||||| || || | Sbjct 239332 CCACCTCTTAATCTAAGGACCAAATGCAATGTTGATTCTTTTTGAATATTGTAATCAGAT 239391 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || |||||||||||||| || ||||| || | ||| ||||| | ||| Sbjct 239392 AAGGTTCTACCATCTTCTAATTGTTTACCAGCGAAAATTAAACGTTGTTGGTCAGGTGGA 239451 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| |||||||| | ||| || || || |||| ||| ||||| ||| Sbjct 239452 ATACCTTCTTTATCTTGGATTTTTGATTTAACATTGTCAATAGTATCTGAAGATTCAACT 239511 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || |||| |||||| || || || ||||| Sbjct 239512 TCTAAAGTGATAGTTTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 239558 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || | ||||||||||||||||| || ||||| Sbjct 239595 TTCTTTTTGAATGTTGTAGTCTGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCGAA 239654 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || | ||| |||||| ||| || ||||||||||| |||||||| | ||| ||||| Sbjct 239655 AATTAAACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATTTTTGATTTGACGTT 239714 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| |||| ||||| ||||| | || || || || || || | || || || Sbjct 239715 ATCAATAGTATCGGAAGATTCAACTTCTAAAGTAATAGTTTTACCTGTTAAGGTTTTAAC 239774 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 239775 GAAAATTTGCAT 239786 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || || || |||||||||||||| || ||||| Sbjct 239823 TTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCAGCGAA 239882 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| ||| |||||| | ||| || |||||||| || || ||||| | ||| ||||| Sbjct 239883 AATCAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTTGGATTTAACGTT 239942 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || ||||| ||||| | || || ||||| || |||| ||| || || Sbjct 239943 ATCGATGGTGTCTGATGATTCAACTTCTAAAGTAATGGTCTTACCAGTCAAAGTTTTAAC 240002 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 240003 GAAAATTTGCAT 240014 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| || || | | || | ||||||||||||||||| || || || Sbjct 240051 TTCTTTTTGGATATTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 240110 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| ||| |||||| | ||| || ||||| || || || ||||| | ||| || || Sbjct 240111 AATCAAACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATTTTTGATTTAACATT 240170 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | ||||| || || || |||| ||| ||||| Sbjct 240171 GTCAATAGTGTCTGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTCAAAGTTTTGAC 240230 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 240231 GAAAATTTGCAT 240242 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || || || |||||||||||||| || || || Sbjct 240279 TTCTTTTTGAATGTTGTAGTCTGATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAA 240338 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| ||| |||||| |||||| ||||||||||| || || || | ||| ||||| Sbjct 240339 AATCAAACGTTGTTGATCTGGTGGGATCCCTTCTTTATCTTGAATCTTGGATTTGACGTT 240398 Query 288402 TTCTATAG 288409 || |||| Sbjct 240399 ATCAATAG 240406 >seq292 Length=16354 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || ||||| || | | || | || |||||||||||||| || || || Sbjct 6429 TTCTTTTTGAATGTTATAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAA 6488 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| |||||| | ||| || ||||||||||| || ||||| | ||| || || Sbjct 6489 GATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGATTTGACATT 6548 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| ||||| ||||| | || || || || || || | ||| || || Sbjct 6549 GTCAATAGTATCAGAAGATTCAACTTCTAAGGTAATGGTTTTACCTGTTAAAGTTTTAAC 6608 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 6609 AAAAATTTGCAT 6620 >seq275 Length=119121 Score = 96.9 bits (106), Expect = 8e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || || || | | || | || |||||||||||||| || || || Sbjct 71174 TTCTTTTTGAATGTTGTAATCAGATAAAGTTCTACCATCTTCTAATTGTTTACCAGCAAA 71233 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | ||| |||||| | ||| || |||||||| || || ||||| | ||| || || Sbjct 71234 GATTAAACGTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGAATTTTTGATTTGACATT 71293 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||||| ||||| | || || ||||| || || | ||| || || Sbjct 71294 GTCAATGGTATCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAAGTTTTAAC 71353 Query 288462 GAA 288464 ||| Sbjct 71354 GAA 71356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648898386792