Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wickerhamomyces_20ciferrii_20[genbank_20GCA_5F000313485.1_202012-09- 21] 364 sequences; 15,901,152 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq277 132 6e-26 >seq277 Length=184736 Score = 132 bits (146), Expect = 6e-26 Identities = 617/969 (64%), Gaps = 28/969 (3%) Strand=Plus/Minus Query 114285 CATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAG 114344 |||| || | |||||||||||| | ||||||| | || |||||| || || ||| | Sbjct 160038 CATCAGCTAAACCTTGGACACCTAAAGCAATTGGTCTATTTCTCATGTTGGATCTTCTTG 159979 Query 114345 CGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCT 114404 | || || ||||| || || | ||| |||| || |||| ||| ||||| ||||| | Sbjct 159978 CTTCTTCAACTGGATAGAAGTTACGATCAATAATTCTGTTTAAATTCTTGGTAACAACTT 159919 Query 114405 TTGTGATTTCATGAAGCTTTTC---GTAATCAAAAC------TGCGAGTCT-------CT 114448 | | |||| ||| | | ||| || || || |||| |||| || Sbjct 159918 TAGCAATTTTATGTAATTGTTCAAAGTTATAGAATTGAGTTTTGCG-GTCTGCTGAAACT 159860 Query 114449 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 ||| ||| | || || | ||| ||||| || | ||||| |||| ||||| | Sbjct 159859 TCAATGA-AGGCT--GGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCATC-TGG 159804 Query 114509 TCA-GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 | | | ||| || | |||||| ||||| || ||||| || ||| | ||||||||||| Sbjct 159803 TGATGAGTATTCAACAATTTCAGTACATAAGTTTGATGATTTGATGATACCCAAGTTCTT 159744 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 |||||| | || ||||||| ||||| ||||||||||||||||| || || || || || Sbjct 159743 TTGATTAGTTTTCTTGTTACAAGCATCTTTGTAAAGCATGTATGGAGTACCAGTTTCAGT 159684 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 114687 ||| | | | ||||| | ||| | | ||| ||||| | | || || Sbjct 159683 TTGAGCTTCCAAGATAGCATACCATAATTTTTGAGCTTTAACAGTCTTTCTACCACGACC 159624 Query 114688 CTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 114747 || | || || | || | ||||||| || ||||| | || | || Sbjct 159623 TTCTTTTTCATAACGTTCATATAATTCTTCAAATTCATCACCATAAGTTTCATCTAAACC 159564 Query 114748 TGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAA 114807 ||| || | || ||| |||| | | ||||| |||| ||||| | |||||||| Sbjct 159563 TGGAGCTTCATTTGGAGAGAATAATGTCCATTCACCATTGCTTTCAACTCTTTTCATGAA 159504 Query 114808 GAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 114867 | |||| |||||| | ||| | ||| | ||| ||| | |||||| | || || Sbjct 159503 TAAATCTGAGATCCATAAAGCAGGGAATAAATCACGAGCTCTGATTTCTTCTTTACCATG 159444 Query 114868 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 114927 ||| | | || | || || | |||||||||||||| ||||| | ||| | || Sbjct 159443 ATTCTTTCTGATATCGATGAAATCAAAAATATCCGCGTGCCATGGTTCTAAGTATAAAGC 159384 Query 114928 GATTG-ACC---CCTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983 | | ||| ||| | |||| | || | ||||| | || ||| || || | Sbjct 159383 AAAAGCACCTGGTCTTTTG-TTACCACCTTGATCAACATAACGAGCAGTGTTGTTGAAGA 159325 Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTAT 115043 | | || ||||||||||||||||| || ||||| || || ||| ||| | Sbjct 159324 CTCTAACCATTGGAATGATACCATTTGAAGTACCATTAGTACCAGCAATGTAAGAACCAG 159265 Query 115044 TGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 115103 | | ||| | | ||| || || | ||||||||| || || ||| || ||| || | Sbjct 159264 TAGATCTAATGTTATGAATATGTAAACCAATACCACCAGCAGTCTTAGAAATTAAGGCAC 159205 Query 115104 ACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC 115163 | | | | | | | || || || || || || ||| | | | || | | ||| | Sbjct 159204 ATTGTTTTAAAGTTTCATAAATACCATCAATAGAATCATCTTGCATAGCAACTAAGAAAC 159145 Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223 | |||||||| || ||| ||||||||||| || | ||||| | || || ||| Sbjct 159144 ATGAAGACATTTGAGGATGTGGAGTACCAGCGTTAAATAAAGTTGGAGAAGCATGTGTGA 159085 Query 115224 ACATACCTT 115232 | ||| ||| Sbjct 159084 A-ATATCTT 159077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350882041120